Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g01981 ATGGTGGACGGCGGCGAATTCGCCGGCACCATTTGCTCGATCTGTTACGACCCTCTCAACCCCATTACCGAGGACCTCCAATCGGTCTCCATCTGCGGCCACGTCTTTCACGAGCTTTGTCTGCAGCAATGGTTCGAGTACTCTTCAAAAGGGAAGAAACACACTTGCCCCATTTGCAAGCAGAGTTGCAGGGCCAGCGACGCATGCAGGCTTTATTTTCAGTCGGTGGGGGACGCGAGCGATGGTGGGAAGCTTCTGCAGAGCTTTGAATCTGAGGAAAATGTTGGCGTTCTGCGTAGGGAAGTGAATAGATTGGAGGTGAAAGTTTCGGGGCTTACTTCTGAGCTGGAACGGCAAACAAAGGAATTGGAAGGAGTTAAGGAGGAGCTTTGTATTTGCAAGGAGCAGGCAAAGATAGAAACAGCATTAAAGAGTGAGGCACTAAATCAAAAAGCGTCCATACAATTCCAGTTTCATATGAAATCAGAGGAACTTGAGAAGTCAACTTTGGAGTCTTTTAGATTAAAAGAAAAGAATATGGCTTTGGCTAAAGAACTTGCAGCATTAAAATTAGTGTCTGATCTGGACCTTGATGAAGAGGAGGTTTTGAAGCTTGCCACTTTCGGTAATGGGGCCAACAGTAAAGACACTATAGATACATTGAAAAGATCTCTGGTCATGCGAAACAGGACTTACAAAGAATTGATGGCCAAGTGCAATGTTCTTGGAAGAGGTGAGGCTCGTTATAGCAAAAAGCTTGAGAAGGCCAAAGAAAAGATCACTAAACTGAAGGCAAGGGTACAAGAACTGGAGACATTAGCTGAAGCAAAAGAGAATGAATATCTGATGTCTCTGAAACTTTCAAAGAGAACGAAGAGTTCAAAGAATCTTGAGAATAGTTACACTGATTCTGATGCATTGACAGCTTGCAAATCTTCAGTAGAAAAACCAAACAAACAAATTTCAACACCCAAATCTGGAATAAACCTGGCTGCAAATGACAACTCTAAATCTCTTGAATCTTCGAAGATCGAGAACTCCAATGCTACTACAAATAAGACTGTGAATATTAGTAATGGAACTTCTGATAAAAAGAGAGACTATGTCACAATTGATGAAGATGACTTAGAAGGCACCAAAGCTTTGCAAGGATGTTCAAAACACAGCCACAAAGACCAAGACATGGATGATATTGCTTTTAGCAAGCCTTCTCTAGCGAAGCCAGAGACCACGTCGGCCACAAAGACCGAAACATTATTGCAAAGAAAATGTACTTTGGCCGAGTCTCCCAGAGTTGATATTGACATTGACATGACTAACAATTCAGCTGGTCCTGTGGATGAAGAAGTAACTTTGCAAACCACCACCAACCAACCTGTGGTGAACATTAGAAAGGAGTCTCCATTTACAGTTTCAAATTCAGATAATATTTGCTTTTCTGGTGGATTGCTTGGTCCTGATGGAACTCATCGATTTTTGGGAAAATGGTGCAAGCGTGGACAGAACAGTGAATCATCATCTGCAAAAAGATCAAGCAATGGGGATTTAATAGCTGTCGGGGCAGACGGTAGAGGTGGCAGAATAAAAGTTCTAAGGACTCCTACCCAAATCCTCTCGGGTGGTAAGGAAAACTCAACAAGTTCGAAAAGATTAAAGCTTGGAGCTAAAACAAGTAGTTTACATTCCCAGGGGTGTCTGCAGATAGAACACTTTTTTGGGAGAGTCACTCAGTAA 1734 0.4268 MVDGGEFAGTICSICYDPLNPITEDLQSVSICGHVFHELCLQQWFEYSSKGKKHTCPICKQSCRASDACRLYFQSVGDASDGGKLLQSFESEENVGVLRREVNRLEVKVSGLTSELERQTKELEGVKEELCICKEQAKIETALKSEALNQKASIQFQFHMKSEELEKSTLESFRLKEKNMALAKELAALKLVSDLDLDEEEVLKLATFGNGANSKDTIDTLKRSLVMRNRTYKELMAKCNVLGRGEARYSKKLEKAKEKITKLKARVQELETLAEAKENEYLMSLKLSKRTKSSKNLENSYTDSDALTACKSSVEKPNKQISTPKSGINLAANDNSKSLESSKIENSNATTNKTVNISNGTSDKKRDYVTIDEDDLEGTKALQGCSKHSHKDQDMDDIAFSKPSLAKPETTSATKTETLLQRKCTLAESPRVDIDIDMTNNSAGPVDEEVTLQTTTNQPVVNIRKESPFTVSNSDNICFSGGLLGPDGTHRFLGKWCKRGQNSESSSAKRSSNGDLIAVGADGRGGRIKVLRTPTQILSGGKENSTSSKRLKLGAKTSSLHSQGCLQIEHFFGRVTQ 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g01981 577 MobiDBLite consensus disorder prediction 316 360 - -
Viun10g01981 577 Pfam Ring finger domain 11 60 IPR001841 -
Viun10g01981 577 Coils Coil 102 129 - -
Viun10g01981 577 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 8 172 IPR013083 -
Viun10g01981 577 ProSiteProfiles Zinc finger RING-type profile. 12 60 IPR001841 -
Viun10g01981 577 PANTHER RING ZINC FINGER PROTEIN-RELATED 1 575 - -
Viun10g01981 577 SUPERFAMILY RING/U-box 10 64 - -
Viun10g01981 577 SMART ringv_2 11 60 IPR011016 GO:0008270
Viun10g01981 577 Coils Coil 246 280 - -
Viun10g01981 577 SMART ring_2 12 59 IPR001841 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g01981 432 577 C3H Transcription Factor Family AT4G01270 41.026 8.09e-24 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g01981 K11985 - gmx:100812811 847.425
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun10g01981 10 34511758 34516006 Viun10g01981 10 34511758 34516006 ECH