Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g01950 ATGAAGGTTGACGTAGAAATAATTTCTAGAGAAGATATTAGACCATCTTCTCCCACACCCTCTCACCTTAGACTCTTCAGGCTTTCCGTTTTGGATCACCTTATCCCATCGCCATATGTTCCAATAATCCTGTTCTACACCTCACCTAAGACTAACACAACTCACCTTTCTGAAGTCCCCAAGAGGTTAGAATTGCTGAAAAAATCTCTATCAGAGACACTAACCAAATTCTACCCTCTAGGTGGCAAAATCAAAGAGGATCTATCCATTGAGTGCAACGATGAAGGTGCTTATTTTGTGCTGGCCCGAGTGAAATGCCCTCTTCATGAATTTCTACTCCAACCCCAGATGACCGCACTACACAAGTTTCTTCCTGTTGGTCTTGTTTCTGAAGGATCAAATTCAGGAACCTATGTCACTAAAATTCAAGTGAACATCTTTGAATGTGGGGGAATCGCCATTGGCATGTGCGTTTCTCATAAGATCATAGACGGAGCTTCACTAAGCACCTTTATCAAAGGGTGGACAGAAAGGGCCAAGGGTTGTAACCAATCAACCCAACCAAACTTCATTGCACCTTCTCTCTTCCCCACTAACAGTCCCTGGTTTAGAGACTTATCTATGAGGACGTGGGCTTCCATCTGCAAACAAGGCAAGTGGGTCACAAGGAGGTTTCTGTTTAGAAACTCAGCTATAGCCACACTCAAGGCTCAAACAGCAGGCACAGAAAACTCCACACGTCTGCAGATGGTTTCTGCTATGCTGTGGAAGTCCCTCATGGGTGTGTCGAAGGCACGGTTTGGTACCCAAAGGCCTTCTTTTGTTACTCATGTGGTGAACCTGAGGGGGAAAATGGACGAGGCTCTGTGTCCTGAACATGCCATGGGAAATATTATTTGGTTGATAGCTGCAGAGAGTGTAGACGCTGATGAGATGGGGTTGGTGGAGTTGGTGGGGAAGTTGAGGACTGCAATATCAAGAGTAGATAAGGAATTTGTTGAAGAATTGAGAGGTGATAAGGGAAGGTCGATTATGCAGGAGAGTTTCGGGGCAATACGTGAGATGGGATCAAAGAGTGATCATTTTGGGTTTACTAGTTGGTGCAATTTTGGGTTCTACGAGGCTGATTTTGGGTGGGGAAAACCCACATGGGTGAATGGTGCTGTTTCAGCTGATTCAGTTTCAAGGTCTACGAATACTATCATGCTAGTGGACACAAGGTTGGGAGATGGCATAGAAGCTTGGGTTACCTTGAGAGAGGAGGATATGACTCTTCTGATAGCAGACCATGAACTCCTCACTTGTGCAACGCTGGATCCAAGTCCTTTGGCAATGAGTTCTGTTGCCTGA 1350 0.4533 MKVDVEIISREDIRPSSPTPSHLRLFRLSVLDHLIPSPYVPIILFYTSPKTNTTHLSEVPKRLELLKKSLSETLTKFYPLGGKIKEDLSIECNDEGAYFVLARVKCPLHEFLLQPQMTALHKFLPVGLVSEGSNSGTYVTKIQVNIFECGGIAIGMCVSHKIIDGASLSTFIKGWTERAKGCNQSTQPNFIAPSLFPTNSPWFRDLSMRTWASICKQGKWVTRRFLFRNSAIATLKAQTAGTENSTRLQMVSAMLWKSLMGVSKARFGTQRPSFVTHVVNLRGKMDEALCPEHAMGNIIWLIAAESVDADEMGLVELVGKLRTAISRVDKEFVEELRGDKGRSIMQESFGAIREMGSKSDHFGFTSWCNFGFYEADFGWGKPTWVNGAVSADSVSRSTNTIMLVDTRLGDGIEAWVTLREEDMTLLIADHELLTCATLDPSPLAMSSVA 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g01950 449 Pfam Transferase family 4 431 - -
Viun10g01950 449 Gene3D - 218 434 IPR023213 -
Viun10g01950 449 PANTHER F21J9.9 6 434 - -
Viun10g01950 449 Gene3D - 1 202 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g01950 Viun-Chr10 34227933 34229424 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g01950 13 426 Monolignol Biosynthesis Gene Families AT5G48930 25.285 9.98e-28 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g01950 - - gmx:100305374 686.026