Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g01949 ATGAAAGTTGAAGTAGAAATAATTTCTAGAGAAGATATTAAACCATCTTCTCCCACACCCTCTCACCTTAGAGTCTTCAGGCTTTCCCTTTTGGACCAACTTATCCCATCGCCATATGCTCCAATAATCCTGTTCTACACCTCACCTAAGAGTAACACAACTTATCTTTCTGAAGTCCCTGAGAGGTTAGAATTGCTGAAAAAATCTCTATCAGAGACACTAACCAAATTCTACCCTCTAGGTGGCAAAATCAAAGAGGATCTGTCCATTGAGTGCAATGATGAAGGTGCTAATTTTGTGCTGGTCCGAGTGAAATGTCCTCTAGATGAATTTCTAGTCCAACCTCAGTTGACCGTACTAAACAAGTTTCTTCCTGTTGGTCTTGTTTCTGAAGGATCAAATTCAGGAACCTATGTCACTAACATTCAAGTGAACATCTTTGAATGTGGGGGAATTGCCATTGGCATGTGCATTTCACATAGGATCCTTGATGGGGCTGCACTAAGCACCTTTATCAAAGGGTGGACAGAAAGGGCCAAGGGTTGTAACCAATCAACCCAACCAAACTTCATTGCACCTTCTCTGTTCCCCGCTAACAGTCCATGGTTTAGAGACTTATCTATGTGGATGTGGGGTTCGTTGTTCAAACAAGGCAAGTGGGTCACAAGGAGGTTTCTGTTTAGAAACTCAGCTATAGCTACACTCAAGGCTCAAACACCAGGCACAGAAAATTCCACACGTCTTCAGATGGTTTCTGCTATGCTGTGGAAGTCCCTCATGGGTGTGTCCAAGGCACGGTTTGGTACCAAAAGACCTTCTTTTGTGACTCATTTGGTGAACCTGAGGAGAAAAATGGATGAGGCTCTTTGTCCTGAACATGGTATGGGAAATGTTCTTTGGTTGATGGCTGCAGAGAGTGTGGATGATAATGAGATGGGGTTGGAGGAGTTGGTGGGGAAGTTGAGGACTGCAATATCAAGAGTAGATAAGGAATTTGTTGAAGAATTGAGAGGAGATAAGGGAAGGTCAATTATCCAGGAGAGTCTCAGGGCAATAGGTGAGATGGGATCAAAGAGTGAAGTGGATTATTTTGGGTTTAGTAGCTGGTGCAATTTTGGGTTCTACGAGGCTGATTTTGGGTGGGGAAAACCCACATGGGTGAGTGGTGGTGGTTCAATTGATTCAGTTTCAATGTTCATGAATCTTATCATCCTAGTGGACACAAGGTTGGGAGACGGAATAGAAGCTTGGGTTACCTTGGAAGAAGAGGATATGATTCATTTGAAAGCAAACCCTGAACTCCTCACTTGTGCAATACTGGATCCAAGTCCTTTAGCAATGAGTTCTGTTGCCTGA 1356 0.4336 MKVEVEIISREDIKPSSPTPSHLRVFRLSLLDQLIPSPYAPIILFYTSPKSNTTYLSEVPERLELLKKSLSETLTKFYPLGGKIKEDLSIECNDEGANFVLVRVKCPLDEFLVQPQLTVLNKFLPVGLVSEGSNSGTYVTNIQVNIFECGGIAIGMCISHRILDGAALSTFIKGWTERAKGCNQSTQPNFIAPSLFPANSPWFRDLSMWMWGSLFKQGKWVTRRFLFRNSAIATLKAQTPGTENSTRLQMVSAMLWKSLMGVSKARFGTKRPSFVTHLVNLRRKMDEALCPEHGMGNVLWLMAAESVDDNEMGLEELVGKLRTAISRVDKEFVEELRGDKGRSIIQESLRAIGEMGSKSEVDYFGFSSWCNFGFYEADFGWGKPTWVSGGGSIDSVSMFMNLIILVDTRLGDGIEAWVTLEEEDMIHLKANPELLTCAILDPSPLAMSSVA 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g01949 451 Gene3D - 218 436 IPR023213 -
Viun10g01949 451 Gene3D - 1 202 IPR023213 -
Viun10g01949 451 PANTHER F21J9.9 6 431 - -
Viun10g01949 451 Pfam Transferase family 4 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g01949 Viun-Chr10 34217989 34219959 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g01949 3 391 Monolignol Biosynthesis Gene Families AT5G48930 25.122 5.77e-27 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g01949 - - gmx:100305374 723.005