Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g01943 ATGAAAGCCATCGAAGATTCCATGTTTGCACTCATCATTCTCTCACCCAACTATGCCTCTTCAACATGGTGTTTGGATGAACTTCAGAAGATTGTGGATTGCAAGAAAGAAGCTTTTCCAATCTTCCATGGCGTAGACCCCTCTGATGTGAGGCATCAAAGAGGGAGCTTTGCCAAGGCCTTCGAAGAGCATGAAGAGAAATTCAGAGAAGACAAAGAGAAGGTGGAAAGATGGAGACATGCCTTGAGACAAGTTGCAAGTTACTCTGGATGGGACTCCAAGGATCAGAGTGAAGCAACACTGATTGAAACAATTGTCGGACACATAGAGAAAAAAATAATTCCTAGACTTCCATGTTTCACAGATAATCTTGTCGGAATTGATTCACGGATGAAAGAAGTGATTTCACTCATGGGCATAGGGTTAAATGATATTCGCTTCATAGGAATATGGGGCATGGGAGGCATAGGTAAAACAACACTGGCTAGATTAGTCTATGAAAAAATCAAAGAGAAATTCAAGGTTTGTTGCTTTCTTGAAAACATCAGAGAGTTGTCTAAGACAAATGGCTTAGTTCACATTCAAAAGGAAATTCTTTCCCATCTTAATGTAAGAAGCAATGATTTTTATAATCTTTATGATGGGAAAAAGATAATAGCAAACTCTTTAAGCAACAAAAAGGTACTTCTTGTTCTTGATGATGTAAGTGACATAAGCCAATTGGAGAATTTAACTGGAAAGCGAGAATGGTTTGGTCCAGGAAGCAGACTAATAATCACAACTAGAGATAAGCACCTGCTAAAGACATATGGAGTGGATGTAACCTATAAGGCCAGAGGCTTAGCCCAAAATGAAGCCCTTCAGCTCTTTTGTTTGAAAGCATTTAAACAAGATCAACCTAAAAAAGAGTATTTGAATTTGTGCAAAGGAGTGGTTGAATATGCAAGAGGCCTTCCATTGGCACTTGAGGTATTGGGTTCCCATCTTTATGGAAGAACCTTTGAGGTTTGGCATAGTGCTTTAGAACAAATAAGAAGCTTTCCACACTCCAAAATCCAAGATACACTGAAAATAAGTTATGACAGTTTGGAACCTCTGGAGAAAAAAATGTTCCTAGATATTGCATGTTTCTTTGTAGGAATGGACATAGATGAAGTGATGAATATCTTGGAAAATTGTGGTGATCATCCCAGAATTGGAATTGACATTTTAACTGAAAGATCTTTGGTAACCCTTGATAGGGTGAGCAATAAGTTGGGGATGCATGATTTGCTACAAGAAATGGGTAGGAATATTGTATATCAAGAATCTCCAAATGACCCAGGGAAACGTAGTAGGTTGTGGTCTCAAAAGGATATTGATTATGTATTGACAAAAAACAAGGGAACTGATGAAATTCGAGGCATTGTTCTGAACTTAGTTCAACCGTATGATTGTGAAGCACGCTGGAACACAGAATCCTTCTCCAAGATAAGTCAGCTAAGGTTTCTCAAGTTATGTGATGTGCAGCTTCCTCGTGGCCTCAGCTGCCTCCCGAGTGCACTAAACGTTGTACATTGGAGAGGATGTCCTCTGAAAACCCTGCCACTTAGTAATCAACTTGATGAAGTTGTTGACCTCAAATTGCCTCACAGCAGAATAGAACAACTTTGGCATGGGACAAAGCTTCTAGACAAGCTAAAGTTCATCAATTTGAGCTTCTCAAAGAACCTGAAGCAATCCCCAGACTTTGTTGGGGTTCCAAATCTTGAATCATTGGTTCTTGAAGGTTGCACAAGTTTAACTGAGGTTCATCCATCCCTTGTACGCCACAAGAAACTTGTTAGTTTGAATTTAAAAGACTGTAAAAAGCTCAAAAGTCTTCCAAGTAAAATGGAGACGAGTTCCTTGAATGATTTAAATCTTTCTGGTTGTTCTCAATTTAAATGTCTTCCAGAGTTTGCTGAAAGCATGGAACATTTGTCAGTGCTTTCTTTAGAGGGGACTGCTATAACAAAGCTACCCACATCACTGGGATGTCTAACTGGCCTTTCTCATTTGGATATGAAGAATTGCAAGAATCTTGTTTGCATTCCAGATACCATTCATAAATTAAGATCTCTCATAGTTCTGAATGTTTCTGGCTGCTCAAAACTTAGTAGTTTGCCAGAGGGCTTAAAGGAAATCAAGTGCTTAGAGGAACTTAATGCAAGTGAAACTGCTATTCAAGAGCTACCTTCATTTGTATTTTATCTTGAAAACCTCAATGATATCTCATTTGCTGGGTGCAAAGGGCCTGTATCAAAATCGGCAAATGGATTTTTTCTCCCCTTTAAGTGGCTGTTTGGGAATCATCAAACTTCTATTGGATTTAGATTACCACCTTCAGCACTGAGTCTACCCTCTTTGAAGAGAATAAATTTAAGTTATTGCAATCTATCTGAAGAGTCATTCCCAGATGATTTTTATTGCTTATCTTCATTGGTGATTCTAGATCTCACTGGCAACAATTTTGTTAGCTTACCAAGTAGCATTTCCAAACTGGCAAGGCTTGAGCGTCTTATCTTAAACTACTGCAAAAAGCTTCAAAGGTTGCCAGAGCTTCCATCAAACATGCGAGGATTGGATGCAAGCAATTGCACTTCATTTGAGATTTCCAAATTCAATCCATCCAAACCATGTAGTCTTTTTGCATCACCTGCAAAATGGCATTTACCAAGACAGCTGAAAGGCGTTTTGGAGAAACTGCGTCTTCCCAGAGAAAGATTTGACATGCTTATCAGAGGGAGTGAAATTCCACCATGGTTTGCCCCTAATAAATGTGTTTCATTTGCAAAAATATCAGTCCCTCATAATTGCCCTATAAATGAATGGGTGGGATTTGCTTTGTGTTTCCTCTTAGTAAGTTATGTTGTCCCTCCTGATGTGTGCCATCATGAAGTTGATTGCTATTTCTTTGGACCTCATGGTAAGGTTTGTATCAGCTCCAGGTGTTTACCGCCCATGGAGCCATGCGATCCTCACCTTTATATTATCTATCTGTCCTTTGATGAATTGCGTGACATAATTTGTAAAGGCGGTGACTGCAGGGAAATTGAATTTGTACTGAAAACGTATTGTTGTCATTCACTTCAAATAGAGAGGTGTGGGAGTCGTTTGGTATGTAAACAAGATGTTGAAGATATTTATGGAAATGGTTTGTAG 3183 0.3899 MKAIEDSMFALIILSPNYASSTWCLDELQKIVDCKKEAFPIFHGVDPSDVRHQRGSFAKAFEEHEEKFREDKEKVERWRHALRQVASYSGWDSKDQSEATLIETIVGHIEKKIIPRLPCFTDNLVGIDSRMKEVISLMGIGLNDIRFIGIWGMGGIGKTTLARLVYEKIKEKFKVCCFLENIRELSKTNGLVHIQKEILSHLNVRSNDFYNLYDGKKIIANSLSNKKVLLVLDDVSDISQLENLTGKREWFGPGSRLIITTRDKHLLKTYGVDVTYKARGLAQNEALQLFCLKAFKQDQPKKEYLNLCKGVVEYARGLPLALEVLGSHLYGRTFEVWHSALEQIRSFPHSKIQDTLKISYDSLEPLEKKMFLDIACFFVGMDIDEVMNILENCGDHPRIGIDILTERSLVTLDRVSNKLGMHDLLQEMGRNIVYQESPNDPGKRSRLWSQKDIDYVLTKNKGTDEIRGIVLNLVQPYDCEARWNTESFSKISQLRFLKLCDVQLPRGLSCLPSALNVVHWRGCPLKTLPLSNQLDEVVDLKLPHSRIEQLWHGTKLLDKLKFINLSFSKNLKQSPDFVGVPNLESLVLEGCTSLTEVHPSLVRHKKLVSLNLKDCKKLKSLPSKMETSSLNDLNLSGCSQFKCLPEFAESMEHLSVLSLEGTAITKLPTSLGCLTGLSHLDMKNCKNLVCIPDTIHKLRSLIVLNVSGCSKLSSLPEGLKEIKCLEELNASETAIQELPSFVFYLENLNDISFAGCKGPVSKSANGFFLPFKWLFGNHQTSIGFRLPPSALSLPSLKRINLSYCNLSEESFPDDFYCLSSLVILDLTGNNFVSLPSSISKLARLERLILNYCKKLQRLPELPSNMRGLDASNCTSFEISKFNPSKPCSLFASPAKWHLPRQLKGVLEKLRLPRERFDMLIRGSEIPPWFAPNKCVSFAKISVPHNCPINEWVGFALCFLLVSYVVPPDVCHHEVDCYFFGPHGKVCISSRCLPPMEPCDPHLYIIYLSFDELRDIICKGGDCREIEFVLKTYCCHSLQIERCGSRLVCKQDVEDIYGNGL 1060
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g01943 1060 Gene3D - 280 368 IPR042197 -
Viun10g01943 1060 Pfam TIR domain 2 111 IPR000157 GO:0007165
Viun10g01943 1060 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 113 374 IPR027417 -
Viun10g01943 1060 Coils Coil 61 81 - -
Viun10g01943 1060 Pfam NB-ARC domain 144 363 IPR002182 GO:0043531
Viun10g01943 1060 SMART till_3 1 88 IPR000157 GO:0007165
Viun10g01943 1060 Gene3D Ribonuclease Inhibitor 643 882 IPR032675 -
Viun10g01943 1060 SUPERFAMILY L domain-like 698 883 - -
Viun10g01943 1060 Gene3D - 1 112 IPR035897 -
Viun10g01943 1060 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 646 IPR044974 GO:0006952
Viun10g01943 1060 PRINTS Disease resistance protein signature 315 329 - -
Viun10g01943 1060 PRINTS Disease resistance protein signature 222 236 - -
Viun10g01943 1060 PRINTS Disease resistance protein signature 696 712 - -
Viun10g01943 1060 PRINTS Disease resistance protein signature 147 162 - -
Viun10g01943 1060 ProSiteProfiles TIR domain profile. 1 113 IPR000157 GO:0007165
Viun10g01943 1060 SUPERFAMILY L domain-like 434 756 - -
Viun10g01943 1060 Gene3D Ribonuclease Inhibitor 477 642 IPR032675 -
Viun10g01943 1060 SMART LRR_typ_2 722 745 IPR003591 -
Viun10g01943 1060 SMART LRR_typ_2 651 674 IPR003591 -
Viun10g01943 1060 SMART LRR_typ_2 818 841 IPR003591 -
Viun10g01943 1060 SMART LRR_typ_2 793 817 IPR003591 -
Viun10g01943 1060 FunFam Disease resistance protein (TIR-NBS-LRR class) 282 364 - -
Viun10g01943 1060 Gene3D - 113 274 IPR027417 -
Viun10g01943 1060 SUPERFAMILY Toll/Interleukin receptor TIR domain 2 91 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g01943 Viun-Chr10 34139795 34146660 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g01943 11 766 WRKY Transcription Factor Family AT4G12020 33.162 7.11e-110 374
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g01943 - - gmx:100815486 1728.76