Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g01933 ATGTTCCTCTTTTTCCTTCTCTTCATTCTCGTTCTCCACACTTCCTCCTCCGCCGCCACCATCATTCTCCAAGGCAACGCCACTCTGCAAAGCCCCAACAACACTTTCCAACTTGGCTTCTTCAATTTCTTCCCAGGCCCGGGCCCAGGCCCGCCGAAATTCTACCTCGCCATCCGCCGCACCTCTTTGCCCAGCCCAAACACCATCTGGGTCGCCAACCGCCTCAACCCCTCCCCCTCCCAAGCCGCTTCATCCCTTCAACTCACCCCAACCGGTCAGTTACTCCTAACCCACTTCAACACCACTCTCTGGACCGCCGCCGCCGCCGCCGCCACCACCACCACCAACCTCACCCTCAAGCTTCTCGATTCCGGAAACCTCGTCCTCCTCACTTCCGACGGCGTCGTTTCATGGCAGAGCTTCGATTCCCCCTCGGACACGTGGCTCCCCGGCATGAACCTCACGCGCTTCAACTCGCTCACCTCTTGGCGCACGGAAACGGACCCTTCCCCGGGGCTTTACACCCTGCGGTTGAAACCATCCTTCTACGGCGAGTTCGAGCTCGTCTTCAACGACACCGTTTCGTACTGGTCCACCGGGAACTGGAGCAATGGGAGATTCCTCAACATCCCCGAGATGACGGTCCCCTACCTCTACGCCTTCCATTTCGCCGCACCGTTCTCCCCCGCCGCGGCCTTCGGTTTCTCCGAACGCGCCATCGAGACGAGCTTCCGACCGCCGACGATGTTCCGCCTGGAGCCCTTCGGGCAGGTCAAGCAGTACTCGTGGAACAGCCAGTCGGGGTCCTGGCAGAAGTTTTGGTTCAAGCCGGAGAATGTGTGCCAGGTTCGGGGACTCTGCGGCGGGTTCGGGGTTTGCACTGGGGAGACATCAAAACTGTGTGAGTGTGTGAGCGGGTTTGAGCCATTGGATGGTCATGGGTGGGGTTCTGGCGATTACTCTCAAGGTTGTCACCGTGTGGGCGCGGGGTGTGATGGGGGTGATGGGTTTGAAGATATCGGTGCTGTGAGGTTTGGATTCGGGAATGTGAGTCTGGATAAGGGGAAAGCTAGAAGCTTTTGCGAGCGCGAGTGTCTGCGCGATTGTGGGTGCGTTGGGTTGAGTTTCGACGAACAGAGTATGTTATGCAGAAAATTTTATGGGTCACTTTCGGATTTTCAGAATGTAACCGACGATGGTGAGAGTGAGGTTTTGCATGTTAGGGTTCCGAGAGGGGGATCTGGGAGGAAGGGGTTTGATTGGAAGGTTTTGAGTGGGGTTGTGATTGGGTCGGTTGCGGTTCTGGGGGTGGTGGTGGTGACATTGTTGGTGATGGTGAAAAAGAGGGTTGGGGGGAAGAAATTGGAAGAGGAGGATGAAGATGGGTTTGTGGGTGTGTTGAATTTGCGCGTGTTTTCTTACAAGGAACTTCAGTTAGCGACACGGGGCTTTTCAGAGAAGATCGGGCACGGAGGGTTCGGAACCGTGTTTCAGGGGGAGTTGAGCGATGGTTCAGTTGTGGCGGTGAAGAGATTGGAGAGGCCAGGGAGTGGGGAGAAGGAGTTCAGAGCTGAGGTCTCCACAATCGGGAACATTCAACACGTGAATCTTGTGAGACTCAGAGGGTTCTGCTCTGAGAATTCTCACCGGCTTCTGGTTTATGAGTATATGCAGAACGGTGCTCTCAGTGTTTATCTGAGGAAGGAAGGGCCTAGTCTGAGTTGGGATGTCAGGTTCAGAGTGGCCGTTGGCACTGCTAAGGGAATTGCTTATTTACACGAGGAATGTAGATGTTGCATCATACATTGTGATATCAAGCCAGAGAACATTCTTCTGGATGGTGATTTCACTGCGAAGGTTTCTGATTTTGGGTTAGCGAAGCTGATTGGGAGGGACTTCAGTAGGGTGTTGGCGACTATGAGGGGAACGTGGGGGTATGTTGCACCGGAGTGGATTTCCGGTGTGGCAATTACAACCAAGGCAGATGTTTACAGCTACGGAATGACAATGCTGGAGCTGATCGGCGGTCGGAGGAACGTGGAGGCGCTGCCGTCTGCGGGGGGTGGAGAGAGTGGTGGTGAAAGTGGGGGGAAGTGGTTCTTCCCGCCGTGGGCCGCGCAGCAGATAATAGAGGGAAATTTTGGTGAAGTGGTTGATAAGAGACTTGGTAATGTGTATAACGTTGAGGAGGCTAGAAGGGTTGGTTTGGTTGCAGTTTGGTGCATTCAAGATGATGAAGCAATGAGGCCTACGATGGGTATGGTGGTGAAGATGTTGGAGGGGTTGGTGGAGGTGAGTGTTCCTCCACCACCAAAGTTGCTTCAAGCGCTGGTTACTGGGGATTCGTTTCATGGGGTGAAGGGTAATTCAGGCAATGGTGTTTCTACTGGTGGAAGCTTATCAGATGGTAACTTACAAGTTTCAACTGCTGATTCTGAATCATACACAGGGAATGTTTTTTCTCCATTAGATGTGAATACCAATGTCAGTGTTCGATAA 2499 0.5378 MFLFFLLFILVLHTSSSAATIILQGNATLQSPNNTFQLGFFNFFPGPGPGPPKFYLAIRRTSLPSPNTIWVANRLNPSPSQAASSLQLTPTGQLLLTHFNTTLWTAAAAAATTTTNLTLKLLDSGNLVLLTSDGVVSWQSFDSPSDTWLPGMNLTRFNSLTSWRTETDPSPGLYTLRLKPSFYGEFELVFNDTVSYWSTGNWSNGRFLNIPEMTVPYLYAFHFAAPFSPAAAFGFSERAIETSFRPPTMFRLEPFGQVKQYSWNSQSGSWQKFWFKPENVCQVRGLCGGFGVCTGETSKLCECVSGFEPLDGHGWGSGDYSQGCHRVGAGCDGGDGFEDIGAVRFGFGNVSLDKGKARSFCERECLRDCGCVGLSFDEQSMLCRKFYGSLSDFQNVTDDGESEVLHVRVPRGGSGRKGFDWKVLSGVVIGSVAVLGVVVVTLLVMVKKRVGGKKLEEEDEDGFVGVLNLRVFSYKELQLATRGFSEKIGHGGFGTVFQGELSDGSVVAVKRLERPGSGEKEFRAEVSTIGNIQHVNLVRLRGFCSENSHRLLVYEYMQNGALSVYLRKEGPSLSWDVRFRVAVGTAKGIAYLHEECRCCIIHCDIKPENILLDGDFTAKVSDFGLAKLIGRDFSRVLATMRGTWGYVAPEWISGVAITTKADVYSYGMTMLELIGGRRNVEALPSAGGGESGGESGGKWFFPPWAAQQIIEGNFGEVVDKRLGNVYNVEEARRVGLVAVWCIQDDEAMRPTMGMVVKMLEGLVEVSVPPPPKLLQALVTGDSFHGVKGNSGNGVSTGGSLSDGNLQVSTADSESYTGNVFSPLDVNTNVSVR 832
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g01933 832 PANTHER OS07G0415500 PROTEIN 5 772 - -
Viun10g01933 832 SMART serkin_6 482 734 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun10g01933 832 CDD STKc_IRAK 488 762 - -
Viun10g01933 832 ProSiteProfiles PAN/Apple domain profile. 331 409 IPR003609 -
Viun10g01933 832 Gene3D - 15 141 IPR036426 -
Viun10g01933 832 Gene3D Transferase(Phosphotransferase) domain 1 557 767 - -
Viun10g01933 832 Pfam D-mannose binding lectin 68 156 IPR001480 -
Viun10g01933 832 FunFam S-receptor-like kinase 5 557 768 - -
Viun10g01933 832 Pfam S-locus glycoprotein domain 197 309 IPR000858 GO:0048544
Viun10g01933 832 PIRSF SRK 1 814 IPR024171 GO:0004674
Viun10g01933 832 SUPERFAMILY Protein kinase-like (PK-like) 466 760 IPR011009 -
Viun10g01933 832 ProSitePatterns Protein kinases ATP-binding region signature. 488 510 IPR017441 GO:0005524
Viun10g01933 832 ProSitePatterns Serine/Threonine protein kinases active-site signature. 600 612 IPR008271 GO:0004672|GO:0006468
Viun10g01933 832 Gene3D Phosphorylase Kinase; domain 1 451 556 - -
Viun10g01933 832 ProSiteProfiles Protein kinase domain profile. 482 763 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun10g01933 832 SMART blect_4 20 144 IPR001480 -
Viun10g01933 832 ProSiteProfiles Bulb-type lectin domain profile. 14 142 IPR001480 -
Viun10g01933 832 FunFam Receptor-like protein kinase 4 444 556 - -
Viun10g01933 832 Pfam Protein kinase domain 485 678 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun10g01933 832 SUPERFAMILY alpha-D-mannose-specific plant lectins 54 202 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g01933 Viun-Chr10 34018592 34021734 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g01933 472 769 Receptor kinase-like Gene Family AT5G20050 47.910 4.01e-83 271
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Viun10g01933 Pkinase 5.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g01933 - - gmx:100778917 1287.32