Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g01909 ATGGCAAAGAAGTCTCAAAGACGCCCTGTGCGGTTTGAGAAAGATAAATCAGGCTGCATGTGGGGTTTCATTAGTATGTTTGATTTTCGACATGGTCATTCCACTAGGAAGATGATTGCAGACAAGAGGCGAAGCAGTAAACATGCTGTTGGGGCCATAAATTCTAAGACTAAGTTCGAGATGAGCAATTTTGATGAAGTTTGTCAAAGCAGTTCGGACAGTGGAGAGAGTAGAAGACCAACAATTGTGACTGCTGCTAATAAGCCTAGCGTGAAGAAACTCATTGAAGAAGAGATGTTCATTGATCAGAATAAAATGAAGGATACAGATAGTGCTCAAATAGAATCAAAGGAATCCAAATTAAGGCGTGATGTACTCTTGAAGTTAGATTCCAAAAGGAAAAAGAAATTTTACCAGAAAAACTGTGATAAGGACATCAATGATTTAAATTTGGACACAACCTTGAAATCTGAAATCACACATAATAAGCACTCAAGGAAGCAATCTAAAGATAATCTTGATCTGGATAAGATGATTGCAGAGTTTTGTCATCTAAAAGATGTTTATTCAATGATGCATGGCAATGACATAGAAGTAGAAGTTGAGGCACAATCAAACCAGAAGCAAGCTATTTCTGAAAATGCAAAAGAAGCAATTTGTGAATTTGTGAATCAGATGGTATTAAATGGCAAAGATCCGGCTGAAGCCAGAAAATTCCTTTGCTCACATCAACTTGTGGAAGCTATCGAGCTTCTAAGTTCAGATAAGGAATTGTTTCTTTCACTTCTACAAAATCCGAATTCACTTTTGTTGAAATGTGTTCAAGAGTTTAGGAATTCTCAGGGAACAAATGAAAAAGAATATGGTCCAGTAGCTGGTTCCAACTTCTCCGAACAAGATCATGGTAACCTGAAACATAATGGGGATCTAGTTAACCACAAGAAGCATAATTTTTTCAGAAAAAAGACGAAGTCTCATTCAAAAAGTTCAGCAAATGAAAACGGGAACACGAATTTGTCAAGTATTGTTATTTTAAAGCCGGGGCAGATGGGCTGGCAAAATTCTGAAACTGGAAACAACCTTGCCTCGCATCAAGATTCCTATGATGTTGTCAAATACAATGGTCCTTCTGTGAGAGGTAGTTCACATTTTTCTCTCACAGAGATAAAAAAGAAACTAAAGCATGCTATGGGAAGGGAGAGACATGGAAACTCGGAAGGGATCTCAAAAAGACATCCTGCGGCTGAATGTCAAAATAGGAAGCCTAGCAGCAAAGTCATTGGTAAAGACAATGTTGGAATGAGATCTCCTAATAAAGATCACTTCTTCATTGAGAAAATTGGAAGACCTGCCACTGGTGTTATGAAAGGAGACAAGACTAGTACAACTAAAGATTTTGAATTGACAATGGAACATGAAAGTGGTAGTTATCCAAAACAAAGGGTTTCTAACTTATATATTGAGGCTAAGAAACATCTGTGTGAAATTGTAGGTAATGGAGATGAGAAAATAGACTTTTCAAGTAGGCAGATTTCTAGAACCCTTGGGAAAATACTATCTCTTCCTGAGTACAACTTTTCTCCCTTTGGAAGTCCCAGAAGGGATTGGGAGCATCATTCAGTCACTGCACAGAAAATATTTTCCACTTCAGATAAGATTTCGATGGGTAATAAGGATAATGTGTCTCCAGAACAAGAATACTCTGTTGGTCATTTTGATCAGGAAATACACAATTCAGGGAAGCAGTCAATAATTTGTGATGAAATCTCTAATAACAAAGTTCAAGCAATTAAGTCAGACTCAAATGTTGCAAATGGTCGCAGCCATGTTGATGAAACACAAAAACTTTGCTCTGATAGAGATGAGATAGTTACTGGAGGTGATGTAGAATCTGCACAAGAGGTGAGTGTTTTGGAATCTTCCTCACAACCAGTTGACCTCAATGCAGGAAAGGAAGACCAAAACTATGGTCTCTCAGAAGTTTCTGATTGTGCAAAATGCTCTCAATATTCAAAACAGGATGTAAAAGAAGAACACAAACCAACATCTCCACTATCATCTCCACCCTACTCTTCCTCCACCAAAGAAAGTGTTACAGATGCATCTGGGCGGCCAAGTCCCATATCTGTTCTTGACACACCGTTCTTTGAAGATGATGTTCAGCCTGTTGAAGTACCAGTCCGGCCACTACAATTTGGAGAACAAAACTCTTCACCTTTGGATGAAATCAATAGAGAAAAATATTGTCTTGAAGAAAATGAATGGATTTATGATTACATCAAAGCAATTCTGCAAACCTCTGGATTGACTATAGATCAATTGTCAAAGAAATGCCTTTCCTCAGACAAGATCCTAGATCCTTCCTTGTTTGACGAGGTAGAGTTCTTACCAAACCAGCTTTCCCATGATCAGAAGCTCATTTATGACTGTGTCAATAATGTTCTCATGGAGGTTTGTCAGAATTACTTTGGATTCTCGCCGTGTCTGTCATTCATAAAACCTGGCATAAGGCCTTCTCCAAACATGATGAAGGTTATTCTCAAAGTCTGGGAAGGAGTGTGTTGGCATTTCCTTTCCTTGCCCCCACCTCGTACCTTAGACAAAATTATTAAAAAAGACATGGATAAAAATGGGACATGGATGGACCTTAGACTTGAAGCTGAAACCATTGGTTCTGAAATGGAAGAAGCCATTCTTGCAGAACTGATGGAAGATACAATACTATGCTGTGTAAGCAAAAGTTCAGAAGGTGATTGTTCTCAGCTTGAATTTGAATATAAGGACAGTGAAAACACCAAAAATGTGTAA 2808 0.3821 MAKKSQRRPVRFEKDKSGCMWGFISMFDFRHGHSTRKMIADKRRSSKHAVGAINSKTKFEMSNFDEVCQSSSDSGESRRPTIVTAANKPSVKKLIEEEMFIDQNKMKDTDSAQIESKESKLRRDVLLKLDSKRKKKFYQKNCDKDINDLNLDTTLKSEITHNKHSRKQSKDNLDLDKMIAEFCHLKDVYSMMHGNDIEVEVEAQSNQKQAISENAKEAICEFVNQMVLNGKDPAEARKFLCSHQLVEAIELLSSDKELFLSLLQNPNSLLLKCVQEFRNSQGTNEKEYGPVAGSNFSEQDHGNLKHNGDLVNHKKHNFFRKKTKSHSKSSANENGNTNLSSIVILKPGQMGWQNSETGNNLASHQDSYDVVKYNGPSVRGSSHFSLTEIKKKLKHAMGRERHGNSEGISKRHPAAECQNRKPSSKVIGKDNVGMRSPNKDHFFIEKIGRPATGVMKGDKTSTTKDFELTMEHESGSYPKQRVSNLYIEAKKHLCEIVGNGDEKIDFSSRQISRTLGKILSLPEYNFSPFGSPRRDWEHHSVTAQKIFSTSDKISMGNKDNVSPEQEYSVGHFDQEIHNSGKQSIICDEISNNKVQAIKSDSNVANGRSHVDETQKLCSDRDEIVTGGDVESAQEVSVLESSSQPVDLNAGKEDQNYGLSEVSDCAKCSQYSKQDVKEEHKPTSPLSSPPYSSSTKESVTDASGRPSPISVLDTPFFEDDVQPVEVPVRPLQFGEQNSSPLDEINREKYCLEENEWIYDYIKAILQTSGLTIDQLSKKCLSSDKILDPSLFDEVEFLPNQLSHDQKLIYDCVNNVLMEVCQNYFGFSPCLSFIKPGIRPSPNMMKVILKVWEGVCWHFLSLPPPRTLDKIIKKDMDKNGTWMDLRLEAETIGSEMEEAILAELMEDTILCCVSKSSEGDCSQLEFEYKDSENTKNV 935
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g01909 935 MobiDBLite consensus disorder prediction 684 706 - -
Viun10g01909 935 MobiDBLite consensus disorder prediction 612 627 - -
Viun10g01909 935 MobiDBLite consensus disorder prediction 400 418 - -
Viun10g01909 935 PANTHER ADHESIN-LIKE PROTEIN, PUTATIVE (DUF3741)-RELATED 1 910 - -
Viun10g01909 935 Pfam Domain of unknown function (DUF4378) 758 905 IPR025486 -
Viun10g01909 935 Pfam Protein of unknown function (DUF3741) 224 268 IPR022212 -
Viun10g01909 935 MobiDBLite consensus disorder prediction 400 432 - -
Viun10g01909 935 MobiDBLite consensus disorder prediction 600 629 - -
Viun10g01909 935 Coils Coil 201 221 - -
Viun10g01909 935 MobiDBLite consensus disorder prediction 673 713 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g01909 Viun-Chr10 33811981 33818129 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g01909 1 893 TRM (TON1 Recruiting Motif) Superfamily AT4G00440 32.391 3.21e-103 338
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g01909 - - gmx:102667950 1416.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun10g01909 10 33811981 33818129 Viun10g01909 10 33811981 33818129 ECH
Viun5g00897 5 5641467 5647774 Viun10g01909 10 33811981 33818129 PCT