Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g01899 ATGGCCAACAAGGGAAGTCCAATGCATGAGAAGATGCAGAAAAACCTTTGCACACAACTTGCTGTTGCAGTGAGAAGCATTCAATGGAGTTATGGGATCTTCTGGGCACCTTCAACCACTGAAGAAAGGGTGCTGGAATGGAGAGAAGGGTACTACAATGGAGACATCAAGACAAGAAAAACTGTTCAAGCCATGGAATTGGAAATGAAAGCTGATAAAATAGGTCTGCAGAGGAGTGAGCAATTGAAGGAACTATACAAGTTTCTTCTTGCAGGTGAAGCTGATCCACAAACCAAAAGGCCTTCTGCTGCATTAGCTCCAGAGGATCTCTCAGATTTGGAGTGGTATTACTTGGTTTGCATGTCCTTTGTTTTCGGTCACAATCAAAGTTTGCCGGGGAGAACACTGGAAATTGGTGACACAATCTGGTTATGCGATGCTCAACATGCAGATAGTAAAATTTTCTCTCGTTCTTTGCTAGCAAAGAGTGCGTCAATTCAGACCGTGGTGTGTTTTCCCTACCAGAAAGGCGTTATTGAGATAGGTTCAACTGAACTGGTTATCGAGGACCCTAATCTGATCCAACATGTGAAGGCTTGCTTCTTAGAAATCTCAAAGCCTACGTGTTCTGATAAATCTTCCTCTGTGCTTGATAAGCCTCATGATGACAAATATCCAACATGTACCAAAAGTGACCACAGGGTGTTTGATGTAATGGCTCTGGAGAATCCATGTTCCCTTGAAAAGAAAATCAAATTTGATAATCATGATCCTGTCAATGGGTTAGAAGGTGATAACAATGAAGATTCTAACATGGATTTTCCTGATGGTTGTGAGCACCATTACCCTATGGAATCCATGATTGATGGTATGAATGGTGTGCCCTCTCAAGTTCATTTTGTGAATGATGCCTTAGTCATTGGTGCTCCTGATTCCCTGAGTTCTTGTGACTGCATGTCTGAAGCTTCTGAGAACCAAGGCAAGGATTCCAAGAATGAAGGCCAAACTCAACTTTTGGAACTTCAAGATTGCTACAGACCAAAGAGAGGATTCTTGGATGCTGGAGCTGATGAAGACTTGTGCTACATCAGAACCCTTTGTGCTATTTTGGGGAACTCGTCAACATTCAAAGCAAACCCTTATGCCGGTAACTCGAATTGCAAATCTAGTTTTGCAAAATGGAAGAAAGGGAGAGTTTCTGAAAGGAAGAGGTCAAAGTTTCACCAAAGCATGTTAAAGAAGACTTTGTTTAAGGTCCCCTTCATGCACAGAAGTTACTTTTCCCGCAAGTCACAGAAAGAGAGTGACAGAATGGAATGGACTAGTAAATTGGAAAATGCTGGTGATGGTTTCATGGGAAAAACATTATCTGATAAGAAAAGAGAAATTAAAAACTTTCAGGTTGTCAAATCTTTGGCTCCATCTTCTATAAGTGAGGAGGAGAAGATATCAATTCTTGGTGACACAATTAAGTACTTGAAAAGGCTTGAGACTAGAGTGGAAGAGCTAGAATCTTACATGGAAGTTGCAGATACTGAAGCAAGAACAAGGAGAAAATGCCCTGATGTTCTGGAACAGATGTCTGATAACTATGGCACCAGAAAGATTTGCATGGGAGTGAAACCTTGGATGAACAAGAGGAAGGCCAGTGGTTTTGATGAGATGGACACAGAACTAGAAAGAATTGTTTGCGAAGAAGCAAAGGCTTTGGATGTGAAAGTGAAGGTAAAGGAGCAGGAGGTTCTGATTGAGATGAAATGTCCTTACAGGGAATACATTCTCTACGATATCATGGATACCATTAACAACCTACATTTAGATGCTCACACAGTTGAATCATCAACAAGTGATGGCGTTCTCTCATTGACACTTAAATCTAAGTTTCGAGGAGCAGCAACAGCACCACTGAGGATGATCAAAGAAGCTCTCTGGAAAGCATATGGAAATGTTTGA 1953 0.4132 MANKGSPMHEKMQKNLCTQLAVAVRSIQWSYGIFWAPSTTEERVLEWREGYYNGDIKTRKTVQAMELEMKADKIGLQRSEQLKELYKFLLAGEADPQTKRPSAALAPEDLSDLEWYYLVCMSFVFGHNQSLPGRTLEIGDTIWLCDAQHADSKIFSRSLLAKSASIQTVVCFPYQKGVIEIGSTELVIEDPNLIQHVKACFLEISKPTCSDKSSSVLDKPHDDKYPTCTKSDHRVFDVMALENPCSLEKKIKFDNHDPVNGLEGDNNEDSNMDFPDGCEHHYPMESMIDGMNGVPSQVHFVNDALVIGAPDSLSSCDCMSEASENQGKDSKNEGQTQLLELQDCYRPKRGFLDAGADEDLCYIRTLCAILGNSSTFKANPYAGNSNCKSSFAKWKKGRVSERKRSKFHQSMLKKTLFKVPFMHRSYFSRKSQKESDRMEWTSKLENAGDGFMGKTLSDKKREIKNFQVVKSLAPSSISEEEKISILGDTIKYLKRLETRVEELESYMEVADTEARTRRKCPDVLEQMSDNYGTRKICMGVKPWMNKRKASGFDEMDTELERIVCEEAKALDVKVKVKEQEVLIEMKCPYREYILYDIMDTINNLHLDAHTVESSTSDGVLSLTLKSKFRGAATAPLRMIKEALWKAYGNV 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g01899 650 PANTHER TRANSCRIPTION FACTOR TT8 11 645 - -
Viun10g01899 650 Coils Coil 493 513 - -
Viun10g01899 650 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 18 201 IPR025610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g01899 Viun-Chr10 33726847 33732089 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g01899 15 646 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G63650 39.110 4.80e-119 365
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g01899 - - gmx:100783746 1153.27