Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g01898 ATGGCCAACAAGGGAAGTCCAATGCATGAGAAGATGCAGAAAAACCTTTGCACACAACTTGCTGTTGCAGTGAGAAGCATTCAATGGAGTTATGGGATCTTCTGGGCACCTTCAACCACTGAAGAAAGGGTGCTGGAATGGAGAGAAGGGTACTACAATGGAGACATCAAGACAAGAAAAACTGTTCAAGCCATGGAATTGGAAATGAAAGCTGATAAAATAGGTCTGCAGAGGAGTGAGCAATTGAAGGAACTATACAAGTTTCTTCTTGCAGGTGAAGCTGATCCACAAACCAAAAGGCCTTCTGCTGCATTAGCTCCAGAGGATCTCTCAGATTTGGAGTGGTATTACTTGGTTTGCATGTCCTTTGTTTTCGGTCACAATCAAAGTAGTTTGCCGGGGAGAACACTGGAAATTGGTGACACAATCTGGTTATGCGATGCTCAACATGCAGATAGTAAAATTTTCTCTCGTTCTTTGCTAGCAAAGAGTGCGTCAATTCAGACCGTGGTGTGTTTTCCCTACCAGAAAGGCGTTATTGAGATAGGTTCAACTGAACTGGTTATCGAGGACCCTAATCTGATCCAACATGTGAAGGCTTGCTTCTTAGAAATCTCAAAGCCTACGTGTTCTGATAAATCTTCCTCTGTGCTTGATAAGCCTCATGATGACAAATATCCAACATGTACCAAAAGTGACCACAGGGTGTTTGATGTAATGGCTCTGGAGAATCCATGTTCCCTTGAAAAGAAAATCAAATTTGATAATCATGATCCTGTCAATGGGTTAGAAGGTGATAACAATGAAGATTCTAACATGGATTTTCCTGATGGTTGTGAGCACCATTACCCTATGGAATCCATGATTGATGGTATGAATGGTGTGCCCTCTCAAGTTCATTTTGTGAATGATGCCTTAGTCATTGGTGCTCCTGATTCCCTGAGTTCTTGTGACTGCATGTCTGAAGCTTCTGAGAACCAAGGCAAGGATTCCAAGAATGAAGGCCAAACTCAACTTTTGGAACTTCAAGATTGCTACAGACCAAAGAGAGGATTCTTGGATGCTGGAGCTGATGAAGACTTGTGCTACATCAGAACCCTTTGTGCTATTTTGGGGAACTCGTCAACATTCAAAGCAAACCCTTATGCCGGTAACTCGAATTGCAAATCTAGTTTTGCAAAATGGAAGAAAGGGAGAGTTTCTGAAAGGAAGAGGTCAAAGTTTCACCAAAGCATGTTAAAGAAGACTTTGTTTAAGGTCCCCTTCATGCACAGAAGTTACTTTTCCCGCAAGTCACAGAAAGAGAGTGACAGAATGGAATGGACTAGTAAATTGGAAAATGCTGGTGATGGTTTCATGGGAAAAACATTATCTGATAAGAAAAGAGAAATTAAAAACTTTCAGGTTGTCAAATCTTTGGCTCCATCTTCTATAAGTGAGGAGGAGAAGATATCAATTCTTGGTGACACAATTAAGTACTTGAAAAGGCTTGAGACTAGAGTGGAAGAGCTAGAATCTTACATGGAAGTTGCAGATACTGAAGCAAGAACAAGGAGAAAATGCCCTGATGTTCTGGAACAGATGTCTGATAACTATGGCACCAGAAAGATTTGCATGGGAGTGAAACCTTGGATGAACAAGAGGAAGGCCAGTGGTTTTGATGAGATGGACACAGAACTAGAAAGAATTGTTTGCGAAGAAGCAAAGGCTTTGGATGTGAAAGTGAAGGTAAAGGAGCAGGAGGTTCTGATTGAGATGAAATGTCCTTACAGGGAATACATTCTCTACGATATCATGGATACCATTAACAACCTACATTTAGATGCTCACACAGTTGAATCATCAACAAGTGATGGCGTTCTCTCATTGACACTTAAATCTAAGTTTCGAGGAGCAGCAACAGCACCACTGAGGATGATCAAAGAAGCTCTCTGGAAAGCATATGGAAATGTTTGA 1956 0.4131 MANKGSPMHEKMQKNLCTQLAVAVRSIQWSYGIFWAPSTTEERVLEWREGYYNGDIKTRKTVQAMELEMKADKIGLQRSEQLKELYKFLLAGEADPQTKRPSAALAPEDLSDLEWYYLVCMSFVFGHNQSSLPGRTLEIGDTIWLCDAQHADSKIFSRSLLAKSASIQTVVCFPYQKGVIEIGSTELVIEDPNLIQHVKACFLEISKPTCSDKSSSVLDKPHDDKYPTCTKSDHRVFDVMALENPCSLEKKIKFDNHDPVNGLEGDNNEDSNMDFPDGCEHHYPMESMIDGMNGVPSQVHFVNDALVIGAPDSLSSCDCMSEASENQGKDSKNEGQTQLLELQDCYRPKRGFLDAGADEDLCYIRTLCAILGNSSTFKANPYAGNSNCKSSFAKWKKGRVSERKRSKFHQSMLKKTLFKVPFMHRSYFSRKSQKESDRMEWTSKLENAGDGFMGKTLSDKKREIKNFQVVKSLAPSSISEEEKISILGDTIKYLKRLETRVEELESYMEVADTEARTRRKCPDVLEQMSDNYGTRKICMGVKPWMNKRKASGFDEMDTELERIVCEEAKALDVKVKVKEQEVLIEMKCPYREYILYDIMDTINNLHLDAHTVESSTSDGVLSLTLKSKFRGAATAPLRMIKEALWKAYGNV 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g01898 651 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 18 202 IPR025610 -
Viun10g01898 651 Coils Coil 494 514 - -
Viun10g01898 651 PANTHER TRANSCRIPTION FACTOR TT8 11 646 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g01898 Viun-Chr10 33726847 33732091 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g01898 15 647 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G63650 39.204 2.76e-117 361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g01898 - - gmx:100783746 1148.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun10g01898 10 33726847 33732091 Viun10g01898 10 33726847 33732091 ECH