Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g01897 ATGGCCAACAAGGGAAGTCCAATGCATGAGAAGATGCAGAAAAACCTTTGCACACAACTTGCTGTTGCAGTGAGAAGCATTCAATGGAGTTATGGGATCTTCTGGGCACCTTCAACCACTGAAGAAAGGGTGCTGGAATGGAGAGAAGGGTACTACAATGGAGACATCAAGACAAGAAAAACTGTTCAAGCCATGGAATTGGAAATGAAAGCTGATAAAATAGGTCTGCAGAGGAGTGAGCAATTGAAGGAACTATACAAGTTTCTTCTTGCAGGTGAAGCTGATCCACAAACCAAAAGGCCTTCTGCTGCATTAGCTCCAGAGGATCTCTCAGATTTGGAGTGGTATTACTTGGTTTGCATGTCCTTTGTTTTCGGTCACAATCAAAGTAGTTTGCCGGGGAGAACACTGGAAATTGGTGACACAATCTGGTTATGCGATGCTCAACATGCAGATAGTAAAATTTTCTCTCGTTCTTTGCTAGCAAAGAGTGCGTCAATTCAGACCGTGGTGTGTTTTCCCTACCAGAAAGGCGTTATTGAGATAGGTTCAACTGAACTGGTTATCGAGGACCCTAATCTGATCCAACATGTGAAGGCTTGCTTCTTAGAAATCTCAAAGCCTACGTGTTCTGATAAATCTTCCTCTGTGCTTGATAAGCCTCATGATGACAAATATCCAACATGTACCAAAAGTGACCACAGGGTGTTTGATGTAATGGCTCTGGAGAATCCATGTTCCCTTGAAAAGAAAATCAAATTTGATAATCATGATCCTGTCAATGGGTTAGAAGGTGATAACAATGAAGATTCTAACATGGATTTTCCTGATGGTTGTGAGCACCATTACCCTATGGAATCCATGATTGATGCTTCTGAGAACCAAGGCAAGGATTCCAAGAATGAAGGCCAAACTCAACTTTTGGAACTTCAAGATTGCTACAGACCAAAGAGAGGATTCTTGGATGCTGGAGCTGATGAAGACTTGTGCTACATCAGAACCCTTTGTGCTATTTTGGGGAACTCGTCAACATTCAAAGCAAACCCTTATGCCGGTAACTCGAATTGCAAATCTAGTTTTGCAAAATGGAAGAAAGGGAGAGTTTCTGAAAGGAAGAGGTCAAAGTTTCACCAAAGCATGTTAAAGAAGACTTTGTTTAAGGTCCCCTTCATGCACAGAAGTTACTTTTCCCGCAAGTCACAGAAAGAGAGTGACAGAATGGAATGGACTAGTAAATTGGAAAATGCTGGTGATGGTTTCATGGGAAAAACATTATCTGATAAGAAAAGAGAAATTAAAAACTTTCAGGTTGTCAAATCTTTGGCTCCATCTTCTATAAGTGAGGAGGAGAAGATATCAATTCTTGGTGACACAATTAAGTACTTGAAAAGGCTTGAGACTAGAGTGGAAGAGCTAGAATCTTACATGGAAGTTGCAGATACTGAAGCAAGAACAAGGAGAAAATGCCCTGATGTTCTGGAACAGATGTCTGATAACTATGGCACCAGAAAGATTTGCATGGGAGTGAAACCTTGGATGAACAAGAGGAAGGCCAGTGGTTTTGATGAGATGGACACAGAACTAGAAAGAATTGTTTGCGAAGAAGCAAAGGCTTTGGATGTGAAAGTGAAGGTAAAGGAGCAGGAGGTTCTGATTGAGATGAAATGTCCTTACAGGGAATACATTCTCTACGATATCATGGATACCATTAACAACCTACATTTAGATGCTCACACAGTTGAATCATCAACAAGTGATGGCGTTCTCTCATTGACACTTAAATCTAAGTTTCGAGGAGCAGCAACAGCACCACTGAGGATGATCAAAGAAGCTCTCTGGAAAGCATATGGAAATGTTTGA 1860 0.4113 MANKGSPMHEKMQKNLCTQLAVAVRSIQWSYGIFWAPSTTEERVLEWREGYYNGDIKTRKTVQAMELEMKADKIGLQRSEQLKELYKFLLAGEADPQTKRPSAALAPEDLSDLEWYYLVCMSFVFGHNQSSLPGRTLEIGDTIWLCDAQHADSKIFSRSLLAKSASIQTVVCFPYQKGVIEIGSTELVIEDPNLIQHVKACFLEISKPTCSDKSSSVLDKPHDDKYPTCTKSDHRVFDVMALENPCSLEKKIKFDNHDPVNGLEGDNNEDSNMDFPDGCEHHYPMESMIDASENQGKDSKNEGQTQLLELQDCYRPKRGFLDAGADEDLCYIRTLCAILGNSSTFKANPYAGNSNCKSSFAKWKKGRVSERKRSKFHQSMLKKTLFKVPFMHRSYFSRKSQKESDRMEWTSKLENAGDGFMGKTLSDKKREIKNFQVVKSLAPSSISEEEKISILGDTIKYLKRLETRVEELESYMEVADTEARTRRKCPDVLEQMSDNYGTRKICMGVKPWMNKRKASGFDEMDTELERIVCEEAKALDVKVKVKEQEVLIEMKCPYREYILYDIMDTINNLHLDAHTVESSTSDGVLSLTLKSKFRGAATAPLRMIKEALWKAYGNV 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g01897 619 Coils Coil 462 482 - -
Viun10g01897 619 PANTHER TRANSCRIPTION FACTOR TT8 11 614 - -
Viun10g01897 619 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 18 202 IPR025610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g01897 Viun-Chr10 33726847 33732091 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g01897 15 615 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G63650 39.550 2.76e-116 357
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g01897 - - gmx:100783746 1070.07