Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g01846 ATGCCAGAAAATAGCATGGAGTTTCAAGGTTTCGCTACAGTGGATGAAGTCATGGCACTTCTTCAACAAGAGTGGACTCAAGAGATTCCATTACACAATGGTTTCCCAATTCAAACTCCACCCATGTTGACACCAAAGATTGAGGTCTCAGCTTTGACGCAGAAGAAGAAGAAGAATAGCTGCAGAAGATGGAGAGGAGAAGAACACAGGTTGTTTCTTTCTGGGCTTGAGAAGTATGGAAGAGGAGACTGGAAAAACATTTCAAGAATGGTTAAAACGAGGAGCGCCACTCAGGTTGCCAGCCATGCCCAGAAATATTTTATTCACTTGGCCTCAGACAAAAGAAGTAAAAGAAGAAGTATCCACGACGTAACATGA 378 0.4286 MPENSMEFQGFATVDEVMALLQQEWTQEIPLHNGFPIQTPPMLTPKIEVSALTQKKKKNSCRRWRGEEHRLFLSGLEKYGRGDWKNISRMVKTRSATQVASHAQKYFIHLASDKRSKRRSIHDVT 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g01846 125 Pfam Myb-like DNA-binding domain 63 107 IPR001005 -
Viun10g01846 125 Gene3D - 62 112 - -
Viun10g01846 125 PANTHER TRANSCRIPTION FACTOR KUA1 54 125 - -
Viun10g01846 125 SMART sant 60 109 IPR001005 -
Viun10g01846 125 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 67 111 IPR017930 -
Viun10g01846 125 SUPERFAMILY Homeodomain-like 58 111 IPR009057 -
Viun10g01846 125 ProSiteProfiles SANT domain profile. 59 111 IPR017884 -
Viun10g01846 125 NCBIfam myb-like DNA-binding domain, SHAQKYF class 62 109 IPR006447 GO:0003677
Viun10g01846 125 ProSiteProfiles Myb-like domain profile. 63 107 IPR001005 -
Viun10g01846 125 CDD SANT 63 107 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g01846 Viun-Chr10 33411666 33412536 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Viun10g01846 Myb_DNA-binding 7.7e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g01846 - - vun:114167607 258.455