Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g01773 ATGGCGCACCCAACCAAGATCCGTAGGACCCAAGATGACACTCACCCCGACACTTGGAGAGCCGCTCTCTCCGAATTCATCTCCACACTCATCTTCGTCTTCGCTGCCTCCGGCTCCACCGTTGCCGTCAAAAACCTCACCGTCGACGCGCCCACCGCTCTCCTCACCGTCGCCGTTGCCAACGCCTTCGCCCTCGTCGTCGCCGTCTCCGTCAGCACAAACGTCTCCGGCGGCTACGTCAACCCCGCAGTCACCTTCGCCGCCTTTGTCAGCGGCAACCTTACCTGGCTCCGCTGCATCATCTTCTGGATCGCGCAGATCCTCGGCTCCGTCATCGCCTGCTTGCTCCTCAAGTTCACCTCCGACGGACAGAGAATACCGGTTTATGGACTTTCGAGCGGTATGAAAGTGGGAAACGCTGTGGTGTTGGAGATGGTGATGACGTTTGGATTGGTGTACGCGGTGTATGCTACCACCGTTGACCCCAGGAGCAGAGGTAAAAGTTTGGGAGCAATAGCGCCGATTGTGATTGGCTTCATCGTTGGAGCGAATACTTTGGTGGGTGGGCCTTTTGATGGGGCTTCCATGAACCCGGCTGCATCGTTTGGGCCTGCCCTGGTGGGCTGGAGCTGGGAAAACCATTGGGTTTACTGGGTTGGGCCTCTCGTTGGTGGTGGGCTTGCTGGGTTTCTTTACGAATTAGTTTTTGTTCGTTACAACCGTCATACTCCATAG 735 0.5701 MAHPTKIRRTQDDTHPDTWRAALSEFISTLIFVFAASGSTVAVKNLTVDAPTALLTVAVANAFALVVAVSVSTNVSGGYVNPAVTFAAFVSGNLTWLRCIIFWIAQILGSVIACLLLKFTSDGQRIPVYGLSSGMKVGNAVVLEMVMTFGLVYAVYATTVDPRSRGKSLGAIAPIVIGFIVGANTLVGGPFDGASMNPAASFGPALVGWSWENHWVYWVGPLVGGGLAGFLYELVFVRYNRHTP 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g01773 244 FunFam Probable aquaporin TIP1-1 4 244 - -
Viun10g01773 244 Pfam Major intrinsic protein 15 232 IPR000425 GO:0015267|GO:0016020|GO:0055085
Viun10g01773 244 Gene3D Glycerol uptake facilitator protein. 4 243 IPR023271 -
Viun10g01773 244 PANTHER AQUAPORIN-8 8 240 IPR034294 -
Viun10g01773 244 SUPERFAMILY Aquaporin-like 14 240 IPR023271 -
Viun10g01773 244 CDD MIP 20 235 IPR000425 GO:0015267|GO:0016020|GO:0055085
Viun10g01773 244 PRINTS Major intrinsic protein family signature 61 85 IPR000425 GO:0015267|GO:0016020|GO:0055085
Viun10g01773 244 PRINTS Major intrinsic protein family signature 143 161 IPR000425 GO:0015267|GO:0016020|GO:0055085
Viun10g01773 244 PRINTS Major intrinsic protein family signature 20 39 IPR000425 GO:0015267|GO:0016020|GO:0055085
Viun10g01773 244 PRINTS Major intrinsic protein family signature 98 117 IPR000425 GO:0015267|GO:0016020|GO:0055085
Viun10g01773 244 PRINTS Major intrinsic protein family signature 215 235 IPR000425 GO:0015267|GO:0016020|GO:0055085
Viun10g01773 244 PRINTS Major intrinsic protein family signature 178 200 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g01773 Viun-Chr10 32682630 32683878 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g01773 7 242 Major Intrinsic Protein MIP AT2G36830 61.088 4.33e-100 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g01773 K09873 - gmx:100820403 362.844