Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g01771 ATGGAAGCACCATCCCAGCTAAAGATACTGACTTTGAAATGGCTATCGGAGCTGACACATATTTGGAAAAATAACAGTCAAGAAGTTCTGAGCTTTCCAAATTTGCAAGAGATCGTTGTCCGTGGTTGTGAAAAATTGAAAAGTTTACTTCCTGCTTCCCTGGCAAAAGCCCTTGAGAAGTTTGAGAAACTTGAAATAGAATCTTGTTATGAACTTCAAGAAATCGTTGCAAAGGAAGTAGACACATCAGCAAACGTAGCAGAAAAGTTTGTGTTCCCTAGCTTAAAGAAGTTGGATCTTTGTGACTTGCCACATCTCACTTACTTTCACAAATTCACTCTTCAGAGCCCTACCTTAAACGAATTATCTGTGTTGGATTGCCATCAGCTGGAGTTATTTCAAAGTGCACATCACACGGGTGAGATTGAAGATACAAGTGCTCCAACTAACCCACAACCTCTTATCTCAAATCTAAAGGCTATTTCCAACTTGAAGAAACTGAGACTTGATTGGAAACACATTTCAGCATCAAGCTTAAGGTTTAGGTCTGAGAAATTTGCAGAAGGCCTCAACTGTTTAGAGAAAATTACCTTGTTCTTTGATGCTGAAGAGAATGAGAAGGCTATGTTGCCCATTGAAATGCTACAAATGGCACCCAATTTAATAGAAATGAGCATAAACTGTTGCAGTGATACTGGTATATTTATTGCTCAACACCCTGAAATTAGTGGAAAGGGGACGCTTGGACAGTTAAAAATATTGACACTTTCTGAAGTATCAGTGCTCCAGTCAATTGAATCAGACCACCCTTCATGGTTAAACATCATCTGTGAGAAGCTGCACGAATTAAATGTTTCTGAATGTCCTCATTTGAGAACATTAGTACATTCTACTTCTGCAGTATCTTTCTCTGATCTAAAAGAAGTGTTTATATCCAAATGTTTGGACTTGCAGTATTTACTTACATCCTCAGCTGCAAAGAGGTTAATGAACCTTGAGAAGATCACAGTGAAGGAATGCAAATCACTGAAAGAAATAGTGGCTAAAGAAGGAGATGAAACTTCAGAAGGCATTATGAAATTTGATCTACTGAACACCATTGCTCTTGAATCTTTACCTAGTCTGATATGTTTTTATTCAGGAAGTGACACTCTCCTTTTACCATCTTTGATCAATGTGCATACAAGGGAATGCGCCAATATGAAATATTTCTCCCGTGGAGCCATTGGTGCTAAATTCTTTCCAGAAATTCCGATGTCATTGTATCCTCATGAAGATTTTCTCTTGCTCGAAGATCTTAACGCCACTGTAACGCAGGCAAATGAAGATTTTCTCTCGCTCCAAGATCTTAACGCCACTGAAAAAGGGGTGTCCCAAGCACAGAAGAAGGCCAAAGACGGAGGCGTAGTGGGAATCGACCTTGGCACAACATACTCGTGTGTTGCTGTATGGATTAAGGGTCGAGCGGAAATCATTTACAACGAACAAGGCAATAACATCACTCCTTCTTTTGTTGCTTTCACAGACCACAATAGGTTAATTGGTGATTCTGCAAAAAATCAGGCTATCGCCAACCCAGAGAACACTATCTTCGATACTAAGAGGCTAATTGGTAGAAAATATACCGATCCCGTTATTCAAGAAGATAAGATGTTTTGGCCATTCAAGGTTGTTGCTGGTAATAATGATAAACCTGTGATTGTGGTTAAGTACAAGGGTCAAGAGAAGCACTTTTGTGCTGAGGAAGTATCATCTATGATTCTGGTGAAGATGCGGGAGATTGCAGAGGCCTATTTGGAAACAACTGTAAAGCATGCAGTTGTTACTGTGCCTGCTTATTTCAATGACGCTCAGCGGAAAGCTACCATAGATGCTGGCGCTATTGCTGGTTTTAATATTTTGCGAATAATCAATGAACCTACTGCTGCAGGTATTGCATATGGCCTTGACATGAGAACCGATCATGTTGGGGAGAGAAACATTTTAATATTTGACCTAGGTGGTGGTACTTTTGATGTGTCTCTCCTCACAATAAAAGGTAAGGTTTTTCAAGTTAAGGCTACAGCTGGAAACACTCATCTTGGAGGAGAGGACTTTGACAACAGAATGGTGAATTACTTTGTAAATGAGTTTAAAAGGAAAAACAAAGTGGATATTAGGGGCAATCCAAGAGCCCTAATGAGATTGAGAAGTGCATGCGAGAGAGCAAAAAGGACACTCTCTTATGCAGTGACTACACTGATTGAGATAGATTCTTTATTTCTTGGCATTGACCTCTGTTCTTCAATCACTCGTGCAAAGTTTGAGGAACTCAATAGAGATTTATTTACAGGGTGTATCGAGATAGTAGAACGTTGTCTTAGTTATGCTAATATGGACAAGACCAATGTACATGATATTGTACTTGTTGGCGGTTCTTCTAGGATTCCCAAAATACAGCAGCTATTGCAAGACTTTTTCAAAGGAAAGAATCTGTGCAAGAGTATCAATCCTGACTTCGCAGTTGCTAGTGGTGCCGCTATACAGGCTGCAGCTTTGTTTAGAGAAGACACTAAGAATGTTCCAGAGTTAGTGTTGTTGGATGTTACACCACAGTCAATTGGGATAGCCGTAGAAGGTGATCACATGAGTGTGGTGATTCCTAGGAATACAACTATTCCTGTAGTAAAGAAACAAACATACAAAACATCTAAAGATAACCAAACCGCTGTTCGGATCGATGTGTATGCGGGTGAGAGAACAAAAGCCAGTGATAACAATTTACTAGGTTCGTATGTTCTGTCTGGTTTTCCTCCAACTTCACGTGGCTACCCTTATGATGTGTGCTTTGCCATAGACGAAAATGGTATCCTATCCGTTTCTGCTGAGGAAAGAAGAACTGGCAATAAGAACCAGATTACCATAACCAATGACCAAGAAACTGGACTATCCACAAAGGAAATTAAAAGAATGAATGAAGATGCAGAGAAATACCAAACTAAATATAAGGGATACCGTAGAAAGGCCAGAGTTAAATTAGCTTTGGAAAAATACGTATACAAGGTGCGGGAGGCTTTGAAGAGAGCAACATATTCAAAGCTTAGCTCAGAAGAAAAAGAGAAGACAATTTCTGCAATTACTAAAGCCACAAATATGATACGTGATGAACATGAAGTAGAGGTGTTGGAGGACTGTCTGAAAAAGCTTGAAAGCCTCCTTGAAGACATCCAGGGAAAAATTGATCCGTACTTGCTGGTTTAA 3240 0.3966 MEAPSQLKILTLKWLSELTHIWKNNSQEVLSFPNLQEIVVRGCEKLKSLLPASLAKALEKFEKLEIESCYELQEIVAKEVDTSANVAEKFVFPSLKKLDLCDLPHLTYFHKFTLQSPTLNELSVLDCHQLELFQSAHHTGEIEDTSAPTNPQPLISNLKAISNLKKLRLDWKHISASSLRFRSEKFAEGLNCLEKITLFFDAEENEKAMLPIEMLQMAPNLIEMSINCCSDTGIFIAQHPEISGKGTLGQLKILTLSEVSVLQSIESDHPSWLNIICEKLHELNVSECPHLRTLVHSTSAVSFSDLKEVFISKCLDLQYLLTSSAAKRLMNLEKITVKECKSLKEIVAKEGDETSEGIMKFDLLNTIALESLPSLICFYSGSDTLLLPSLINVHTRECANMKYFSRGAIGAKFFPEIPMSLYPHEDFLLLEDLNATVTQANEDFLSLQDLNATEKGVSQAQKKAKDGGVVGIDLGTTYSCVAVWIKGRAEIIYNEQGNNITPSFVAFTDHNRLIGDSAKNQAIANPENTIFDTKRLIGRKYTDPVIQEDKMFWPFKVVAGNNDKPVIVVKYKGQEKHFCAEEVSSMILVKMREIAEAYLETTVKHAVVTVPAYFNDAQRKATIDAGAIAGFNILRIINEPTAAGIAYGLDMRTDHVGERNILIFDLGGGTFDVSLLTIKGKVFQVKATAGNTHLGGEDFDNRMVNYFVNEFKRKNKVDIRGNPRALMRLRSACERAKRTLSYAVTTLIEIDSLFLGIDLCSSITRAKFEELNRDLFTGCIEIVERCLSYANMDKTNVHDIVLVGGSSRIPKIQQLLQDFFKGKNLCKSINPDFAVASGAAIQAAALFREDTKNVPELVLLDVTPQSIGIAVEGDHMSVVIPRNTTIPVVKKQTYKTSKDNQTAVRIDVYAGERTKASDNNLLGSYVLSGFPPTSRGYPYDVCFAIDENGILSVSAEERRTGNKNQITITNDQETGLSTKEIKRMNEDAEKYQTKYKGYRRKARVKLALEKYVYKVREALKRATYSKLSSEEKEKTISAITKATNMIRDEHEVEVLEDCLKKLESLLEDIQGKIDPYLLV 1079
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g01771 1079 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 1005 1073 IPR029048 -
Viun10g01771 1079 ProSitePatterns Heat shock hsp70 proteins family signature 2. 663 676 IPR018181 -
Viun10g01771 1079 Gene3D - 470 844 - -
Viun10g01771 1079 FunFam Heat shock protein 70 470 658 - -
Viun10g01771 1079 ProSitePatterns Heat shock hsp70 proteins family signature 1. 472 479 IPR018181 -
Viun10g01771 1079 Gene3D Ribonuclease Inhibitor 1 141 IPR032675 -
Viun10g01771 1079 Gene3D Ribonuclease Inhibitor 142 320 IPR032675 -
Viun10g01771 1079 PANTHER HEAT SHOCK PROTEIN 70KDA 469 1036 IPR013126 GO:0005524|GO:0140662
Viun10g01771 1079 Gene3D - 531 586 - -
Viun10g01771 1079 Gene3D - 652 826 - -
Viun10g01771 1079 SUPERFAMILY Actin-like ATPase domain 469 651 IPR043129 -
Viun10g01771 1079 PRINTS 70kDa heat shock protein signature 468 481 - -
Viun10g01771 1079 PRINTS 70kDa heat shock protein signature 496 508 - -
Viun10g01771 1079 PRINTS 70kDa heat shock protein signature 518 526 - -
Viun10g01771 1079 PRINTS 70kDa heat shock protein signature 936 952 - -
Viun10g01771 1079 PRINTS 70kDa heat shock protein signature 606 626 - -
Viun10g01771 1079 PRINTS 70kDa heat shock protein signature 797 813 - -
Viun10g01771 1079 PRINTS 70kDa heat shock protein signature 856 875 - -
Viun10g01771 1079 PRINTS 70kDa heat shock protein signature 669 679 - -
Viun10g01771 1079 PRINTS 70kDa heat shock protein signature 829 849 - -
Viun10g01771 1079 Gene3D - 1006 1074 IPR029048 -
Viun10g01771 1079 Coils Coil 430 450 - -
Viun10g01771 1079 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 851 1005 IPR029047 -
Viun10g01771 1079 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 853 1007 IPR029047 -
Viun10g01771 1079 Coils Coil 1052 1072 - -
Viun10g01771 1079 Gene3D Actin; Chain A, domain 4 695 778 - -
Viun10g01771 1079 FunFam heat shock 70 kDa protein-like 531 586 - -
Viun10g01771 1079 SUPERFAMILY Actin-like ATPase domain 658 846 IPR043129 -
Viun10g01771 1079 ProSitePatterns Heat shock hsp70 proteins family signature 3. 800 814 IPR018181 -
Viun10g01771 1079 FunFam Heat shock 70 kDa 695 778 - -
Viun10g01771 1079 Pfam Hsp70 protein 469 1071 IPR013126 GO:0005524|GO:0140662
Viun10g01771 1079 SUPERFAMILY L domain-like 5 346 - -
Viun10g01771 1079 Coils Coil 981 1001 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g01771 Viun-Chr10 32668636 32678585 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g01771 466 1069 Calmodulin-binding Proteins AT3G12580 62.664 0.0 772
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g01771 K03283 - gmx:102667578 839.336