Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g01770 ATGGAAGCACCATCCCAGCTAAAGATACTGACTTTGAAATGGCTATCGGAGCTGACACATATTTGGAAAAATAACAGTCAAGAAGTTCTGAGCTTTCCAAATTTGCAAGAGATCGTTGTCCGTGGTTGTGAAAAATTGAAAAGTTTACTTCCTGCTTCCCTGGCAAAAGCCCTTGAGAAGTTTGAGAAACTTGAAATAGAATCTTGTTATGAACTTCAAGAAATCGTTGCAAAGGAAGTAGACACATCAGCAAACGTAGCAGAAAAGTTTGTGTTCCCTAGCTTAAAGAAGTTGGATCTTTGTGACTTGCCACATCTCACTTACTTTCACAAATTCACTCTTCAGAGCCCTACCTTAAACGAATTATCTGTGTTGGATTGCCATCAGCTGGAGTTATTTCAAAGTGCACATCACACGGGTGAGATTGAAGATACAAGTGCTCCAACTAACCCACAACCTCTTATCTCAAATCTAAAGGCTATTTCCAACTTGAAGAAACTGAGACTTGATTGGAAACACATTTCAGCATCAAGCTTAAGGTTTAGGTCTGAGAAATTTGCAGAAGGCCTCAACTGTTTAGAGAAAATTACCTTGTTCTTTGATGCTGAAGAGAATGAGAAGGCTATGTTGCCCATTGAAATGCTACAAATGGCACCCAATTTAATAGAAATGAGCATAAACTGTTGCAGTGATACTGGTATATTTATTGCTCAACACCCTGAAATTAGTGGAAAGGGGACGCTTGGACAGTTAAAAATATTGACACTTTCTGAAGTATCAGTGCTCCAGTCAATTGAATCAGACCACCCTTCATGGTTAAACATCATCTGTGAGAAGCTGCACGAATTAAATGTTTCTGAATGTCCTCATTTGAGAACATTAGTACATTCTACTTCTGCAGTATCTTTCTCTGATCTAAAAGAAGTGTTTATATCCAAATGTTTGGACTTGCAGTATTTACTTACATCCTCAGCTGCAAAGAGGTTAATGAACCTTGAGAAGATCACAGTGAAGGAATGCAAATCACTGAAAGAAATAGTGGCTAAAGAAGGAGATGAAACTTCAGAAGGCATTATGAAATTTGATCTACTGAACACCATTGCTCTTGAATCTTTACCTAGTCTGATATGTTTTTATTCAGGAAGTGACACTCTCCTTTTACCATCTTTGATCAATGTGCATACAAGGGAATGCGCCAATATGAAATATTTCTCCCGTGGAGCCATTGGTGCTAAATTCTTTCCAGAAATTCCGATGTCATTGTATCCTCATGAAGATTTTCTCTTGCTCGAAGATCTTAACGCCACTGTAACGCAGGCAAATGAAGATTTTCTCTCGCTCCAAGATCTTAACGCCACTGAAAAAGGGGTGTCCCAAGCACAGAAGGCCAAAGACGGAGGCGTAGTGGGAATCGACCTTGGCACAACATACTCGTGTGTTGCTGTATGGATTAAGGGTCGAGCGGAAATCATTTACAACGAACAAGGCAATAACATCACTCCTTCTTTTGTTGCTTTCACAGACCACAATAGGTTAATTGGTGATTCTGCAAAAAATCAGGCTATCGCCAACCCAGAGAACACTATCTTCGATACTAAGAGGCTAATTGGTAGAAAATATACCGATCCCGTTATTCAAGAAGATAAGATGTTTTGGCCATTCAAGGTTGTTGCTGGTAATAATGATAAACCTGTGATTGTGGTTAAGTACAAGGGTCAAGAGAAGCACTTTTGTGCTGAGGAAGTATCATCTATGATTCTGGTGAAGATGCGGGAGATTGCAGAGGCCTATTTGGAAACAACTGTAAAGCATGCAGTTGTTACTGTGCCTGCTTATTTCAATGACGCTCAGCGGAAAGCTACCATAGATGCTGGCGCTATTGCTGGTTTTAATATTTTGCGAATAATCAATGAACCTACTGCTGCAGGTATTGCATATGGCCTTGACATGAGAACCGATCATGTTGGGGAGAGAAACATTTTAATATTTGACCTAGGTGGTGGTACTTTTGATGTGTCTCTCCTCACAATAAAAGGTAAGGTTTTTCAAGTTAAGGCTACAGCTGGAAACACTCATCTTGGAGGAGAGGACTTTGACAACAGAATGGTGAATTACTTTGTAAATGAGTTTAAAAGGAAAAACAAAGTGGATATTAGGGGCAATCCAAGAGCCCTAATGAGATTGAGAAGTGCATGCGAGAGAGCAAAAAGGACACTCTCTTATGCAGTGACTACACTGATTGAGATAGATTCTTTATTTCTTGGCATTGACCTCTGTTCTTCAATCACTCGTGCAAAGTTTGAGGAACTCAATAGAGATTTATTTACAGGGTGTATCGAGATAGTAGAACGTTGTCTTAGTTATGCTAATATGGACAAGACCAATGTACATGATATTGTACTTGTTGGCGGTTCTTCTAGGATTCCCAAAATACAGCAGCTATTGCAAGACTTTTTCAAAGGAAAGAATCTGTGCAAGAGTATCAATCCTGACTTCGCAGTTGCTAGTGGTGCCGCTATACAGGCTGCAGCTTTGTTTAGAGAAGACACTAAGAATGTTCCAGAGTTAGTGTTGTTGGATGTTACACCACAGTCAATTGGGATAGCCGTAGAAGGTGATCACATGAGTGTGGTGATTCCTAGGAATACAACTATTCCTGTAGTAAAGAAACAAACATACAAAACATCTAAAGATAACCAAACCGCTGTTCGGATCGATGTGTATGCGGGTGAGAGAACAAAAGCCAGTGATAACAATTTACTAGGTTCGTATGTTCTGTCTGGTTTTCCTCCAACTTCACGTGGCTACCCTTATGATGTGTGCTTTGCCATAGACGAAAATGGTATCCTATCCGTTTCTGCTGAGGAAAGAAGAACTGGCAATAAGAACCAGATTACCATAACCAATGACCAAGAAACTGGACTATCCACAAAGGAAATTAAAAGAATGAATGAAGATGCAGAGAAATACCAAACTAAATATAAGGGATACCGTAGAAAGGCCAGAGTTAAATTAGCTTTGGAAAAATACGTATACAAGGTGCGGGAGGCTTTGAAGAGAGCAACATATTCAAAGCTTAGCTCAGAAGAAAAAGAGAAGACAATTTCTGCAATTACTAAAGCCACAAATATGATACGTGATGAACATGAAGTAGAGGTGTTGGAGGACTGTCTGAAAAAGCTTGAAAGCCTCCTTGAAGACATCCAGGGAAAAATTGATCCGTACTTGCTGGTTTAA 3237 0.3967 MEAPSQLKILTLKWLSELTHIWKNNSQEVLSFPNLQEIVVRGCEKLKSLLPASLAKALEKFEKLEIESCYELQEIVAKEVDTSANVAEKFVFPSLKKLDLCDLPHLTYFHKFTLQSPTLNELSVLDCHQLELFQSAHHTGEIEDTSAPTNPQPLISNLKAISNLKKLRLDWKHISASSLRFRSEKFAEGLNCLEKITLFFDAEENEKAMLPIEMLQMAPNLIEMSINCCSDTGIFIAQHPEISGKGTLGQLKILTLSEVSVLQSIESDHPSWLNIICEKLHELNVSECPHLRTLVHSTSAVSFSDLKEVFISKCLDLQYLLTSSAAKRLMNLEKITVKECKSLKEIVAKEGDETSEGIMKFDLLNTIALESLPSLICFYSGSDTLLLPSLINVHTRECANMKYFSRGAIGAKFFPEIPMSLYPHEDFLLLEDLNATVTQANEDFLSLQDLNATEKGVSQAQKAKDGGVVGIDLGTTYSCVAVWIKGRAEIIYNEQGNNITPSFVAFTDHNRLIGDSAKNQAIANPENTIFDTKRLIGRKYTDPVIQEDKMFWPFKVVAGNNDKPVIVVKYKGQEKHFCAEEVSSMILVKMREIAEAYLETTVKHAVVTVPAYFNDAQRKATIDAGAIAGFNILRIINEPTAAGIAYGLDMRTDHVGERNILIFDLGGGTFDVSLLTIKGKVFQVKATAGNTHLGGEDFDNRMVNYFVNEFKRKNKVDIRGNPRALMRLRSACERAKRTLSYAVTTLIEIDSLFLGIDLCSSITRAKFEELNRDLFTGCIEIVERCLSYANMDKTNVHDIVLVGGSSRIPKIQQLLQDFFKGKNLCKSINPDFAVASGAAIQAAALFREDTKNVPELVLLDVTPQSIGIAVEGDHMSVVIPRNTTIPVVKKQTYKTSKDNQTAVRIDVYAGERTKASDNNLLGSYVLSGFPPTSRGYPYDVCFAIDENGILSVSAEERRTGNKNQITITNDQETGLSTKEIKRMNEDAEKYQTKYKGYRRKARVKLALEKYVYKVREALKRATYSKLSSEEKEKTISAITKATNMIRDEHEVEVLEDCLKKLESLLEDIQGKIDPYLLV 1078
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g01770 1078 PANTHER HEAT SHOCK PROTEIN 70KDA 468 1035 IPR013126 GO:0005524|GO:0140662
Viun10g01770 1078 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 852 1006 IPR029047 -
Viun10g01770 1078 SUPERFAMILY Actin-like ATPase domain 657 845 IPR043129 -
Viun10g01770 1078 Gene3D - 469 843 - -
Viun10g01770 1078 FunFam Heat shock 70 kDa 694 777 - -
Viun10g01770 1078 Gene3D Actin; Chain A, domain 4 694 777 - -
Viun10g01770 1078 Coils Coil 1051 1071 - -
Viun10g01770 1078 FunFam heat shock 70 kDa protein-like 530 585 - -
Viun10g01770 1078 SUPERFAMILY Actin-like ATPase domain 468 650 IPR043129 -
Viun10g01770 1078 ProSitePatterns Heat shock hsp70 proteins family signature 1. 471 478 IPR018181 -
Viun10g01770 1078 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 850 1004 IPR029047 -
Viun10g01770 1078 Gene3D - 530 585 - -
Viun10g01770 1078 Gene3D Ribonuclease Inhibitor 142 320 IPR032675 -
Viun10g01770 1078 Gene3D Ribonuclease Inhibitor 1 141 IPR032675 -
Viun10g01770 1078 Coils Coil 430 450 - -
Viun10g01770 1078 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 1004 1072 IPR029048 -
Viun10g01770 1078 ProSitePatterns Heat shock hsp70 proteins family signature 2. 662 675 IPR018181 -
Viun10g01770 1078 Gene3D - 651 825 - -
Viun10g01770 1078 Gene3D - 1005 1073 IPR029048 -
Viun10g01770 1078 FunFam Heat shock protein 70 469 657 - -
Viun10g01770 1078 PRINTS 70kDa heat shock protein signature 668 678 - -
Viun10g01770 1078 PRINTS 70kDa heat shock protein signature 828 848 - -
Viun10g01770 1078 PRINTS 70kDa heat shock protein signature 605 625 - -
Viun10g01770 1078 PRINTS 70kDa heat shock protein signature 517 525 - -
Viun10g01770 1078 PRINTS 70kDa heat shock protein signature 855 874 - -
Viun10g01770 1078 PRINTS 70kDa heat shock protein signature 495 507 - -
Viun10g01770 1078 PRINTS 70kDa heat shock protein signature 935 951 - -
Viun10g01770 1078 PRINTS 70kDa heat shock protein signature 467 480 - -
Viun10g01770 1078 PRINTS 70kDa heat shock protein signature 796 812 - -
Viun10g01770 1078 Coils Coil 980 1000 - -
Viun10g01770 1078 SUPERFAMILY RNI-like 6 347 - -
Viun10g01770 1078 ProSitePatterns Heat shock hsp70 proteins family signature 3. 799 813 IPR018181 -
Viun10g01770 1078 Pfam Hsp70 protein 468 1070 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g01770 Viun-Chr10 32668629 32678585 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g01770 465 1068 Calmodulin-binding Proteins AT3G12580 62.664 0.0 773
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g01770 K03283 - gmx:102667578 839.336