Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g01727 ATGGCTTCTAAAAGGGTGCGCCCCGAAGATGCTTCTCTGGACAAGCGTCGCAGGGGAATCGGAGCTGAGAAAATGGAGCGACAGGGTGGTGCCGCTGCTCCTGGGAGGCACAGAACACCGTTTTCCGTTGTCACAAATCGCTCCGACCTTAACACGACGAGCGATGTCAGCGAGGCGGTTGATTTCACGAAAGAGGAGGTGGAGGCTTTGCTGAACGAAAAGAAGAAGGGAAATACCTATGATAGTAAGAAAAAGATGGAGCAGATGACGGATCTTATTAAGCGCCTTAAGGCCTGCGTTCGCTGGTATAAAAGGATAGAAGAAGGGTATGTCCAAGAAAAGGAAAAGCTTCAGTCTGAGCTAGAGGCTTCTGAGAAGAAGTGCAGTGATACTGTGACTGAGATGAAGAATAAGATTGATGAGTTGATGGAGGCTCTATCTGATTCGAGGAAGACAATTTCTTGTCTAGAAGAGAGAATTGTGAAGGAAGAATCAGATAAATTGGAAGCGATTAATTCTTATGGTAAAGAAAAGGAAGCCAGAACTGAGGCTGAGAAAGTTCGGGATGAGAAGTCAGCTGAGCTTGAGAAAGTTCGGGATGAGAAATTAGTTGCTGAGAAGAAGGCCATTTCAAACGAAGATTTGTACAAGCGATCACAGGAGTATAATATGAGCTTGCAGCAGTACAATAGTCGTCTTCAGTTTGATCTTGAAACAGTTAATGAGGCCCTTAAACGGCTTGAAACTGAGAAAGCAACCATTGTTGAGAGCCTTAGTAATTTAAGAGGCCACAATAAGGCATTGCAGGATCAGTTGGCATCTCTTAAGGTTTCACAGGACGAGACTATAAAGAAGAAAGAAATTTTAGTAAATGAGCTCAAATGTCTTCGTGAGGAGTTAAAGCAACTTAGAGATGATCGTGACAGTCAGTTGGAGCAAGTACATGCTCTAACTGGAGAAATAGCGAGACACAAAGAATATACTGGGAAAACATGTACACAATTGGATACATTGATGATTAAAACAAATGCTCTTGAGGAAACTTGTTCATCTCAAAAGGATCAAATACACATACTGCAGCAGCAGTTGTTTTCTGAAAGAGAGAAGTTAAAGAATACCGATCTATCAGCTTCAGAAACAAGAACAATGTTTGAAGAGCAGAAGAGAATTATACAGGGGCTACAGGAGCGGTTAGCAGATAAAGAATTTCAAGTCGTAGAAGGAGAGAAGCTAAGAAAAAAACTGCATAACACTATTTTGGAGCTCAAAGGAAATATTCGTGTTTTCTGCCGTGTACGGCCGCTCCTACCAGATGACAGTGAGGACACGGTTGTTTCATTCCCTACTTCAACAGAAGCGCTTGGTCGGGGCATTGAATTGTTACAAAACGGTCAAAAATACAATTTCACTTTTGACAAGGTGTTCAATCACGAGGCTTCTCAGCAGGACGTTTTTGTAGAGATATCACAGCTGGTACAAAGTGCACTTGATGGCTACAAGGTGTGCATCTTTGCATATGGACAGACGGGTTCAGGTAAAACCTATACTATGATGGGTAGGCCTGATGAGCCAGATCTGAAAGGGTTGATACCCCGTTCTTTAGAACAGATATTCCAGACCAGCCAGTCTCTAAAAGATCAAGGATGGAAGTACACAATGCAGGCATCAATTCTGGAAATATATTGTGACACCATCAGGGATTTGTTATTAACCAATCGGTCAAGTGATCATGCACGAACGGAAAATAGTGCTTCCACCAAACAGTACACTATAAGCCATGATGCAAATGGAAACACACATGTTTCGGACCTCACAATAAAGGATGTTTGTAGCGCAGATGAGATTTCCTCCCTCCTGCGACAGGCAGCACAAAGCAGGTCAGTGGGAAGAACACAAATGAATGAAGAGTCATCCAGAAGCCATTTTGTCTTTACACTGAGAATTAGTGGGAAAAATGAGAACACTGAACAACAAGTCCACGGTGTCTTAAACCTGATCGATCTTGCTGGAAGTGAAAGACTCTCAAGGAGTGGGGCAACTGGAGATCGGTTGAAGGAAGCTCAGGCTATCAACAAAAGTCTATCGAGTTTGAGCGATGTGATACTTGCTTTGGGAGGAAAGAAAGAAGATCATGTTCCTTTTAGGAATTCAAAGCTGACGTACCTTCTCCAGCCATGTCTCGGTGGCGACTCCAAAACGTTGATGTTTGTCAACATCTCACCCGATCAATCTTCCACTGGTGAGTCACTTTGCTCCCTACGCTTTGCAGCCAAAGTCAATGCCTGTGAAATTGGGATTCCACGGCGTCAGACTCATACATCATCATCACGCTCCTCAGAATCCCGTTTGAGCTACGGTTAA 2361 0.4337 MASKRVRPEDASLDKRRRGIGAEKMERQGGAAAPGRHRTPFSVVTNRSDLNTTSDVSEAVDFTKEEVEALLNEKKKGNTYDSKKKMEQMTDLIKRLKACVRWYKRIEEGYVQEKEKLQSELEASEKKCSDTVTEMKNKIDELMEALSDSRKTISCLEERIVKEESDKLEAINSYGKEKEARTEAEKVRDEKSAELEKVRDEKLVAEKKAISNEDLYKRSQEYNMSLQQYNSRLQFDLETVNEALKRLETEKATIVESLSNLRGHNKALQDQLASLKVSQDETIKKKEILVNELKCLREELKQLRDDRDSQLEQVHALTGEIARHKEYTGKTCTQLDTLMIKTNALEETCSSQKDQIHILQQQLFSEREKLKNTDLSASETRTMFEEQKRIIQGLQERLADKEFQVVEGEKLRKKLHNTILELKGNIRVFCRVRPLLPDDSEDTVVSFPTSTEALGRGIELLQNGQKYNFTFDKVFNHEASQQDVFVEISQLVQSALDGYKVCIFAYGQTGSGKTYTMMGRPDEPDLKGLIPRSLEQIFQTSQSLKDQGWKYTMQASILEIYCDTIRDLLLTNRSSDHARTENSASTKQYTISHDANGNTHVSDLTIKDVCSADEISSLLRQAAQSRSVGRTQMNEESSRSHFVFTLRISGKNENTEQQVHGVLNLIDLAGSERLSRSGATGDRLKEAQAINKSLSSLSDVILALGGKKEDHVPFRNSKLTYLLQPCLGGDSKTLMFVNISPDQSSTGESLCSLRFAAKVNACEIGIPRRQTHTSSSRSSESRLSYG 786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g01727 786 Coils Coil 181 208 - -
Viun10g01727 786 CDD KISc_C_terminal 423 764 - -
Viun10g01727 786 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 384 760 IPR027417 -
Viun10g01727 786 MobiDBLite consensus disorder prediction 1 42 - -
Viun10g01727 786 PANTHER KINESIN-LIKE PROTEIN KLP-3 275 774 IPR027640 GO:0003777|GO:0007018
Viun10g01727 786 ProSiteProfiles Kinesin motor domain profile. 425 762 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Viun10g01727 786 MobiDBLite consensus disorder prediction 1 24 - -
Viun10g01727 786 Coils Coil 107 159 - -
Viun10g01727 786 ProSitePatterns Kinesin motor domain signature. 661 672 IPR019821 GO:0003777|GO:0005524|GO:0007018
Viun10g01727 786 Gene3D Kinesin motor domain 369 764 IPR036961 -
Viun10g01727 786 Pfam Kinesin motor domain 431 760 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Viun10g01727 786 SMART kinesin_4 423 770 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Viun10g01727 786 Coils Coil 230 320 - -
Viun10g01727 786 PRINTS Kinesin heavy chain signature 631 648 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Viun10g01727 786 PRINTS Kinesin heavy chain signature 662 680 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Viun10g01727 786 PRINTS Kinesin heavy chain signature 498 519 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Viun10g01727 786 PRINTS Kinesin heavy chain signature 712 733 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Viun10g01727 786 FunFam Kinesin-like protein 371 764 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g01727 Viun-Chr10 32424600 32429915 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g01727 334 759 Calmodulin-binding Proteins AT5G65930 38.051 1.20e-77 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g01727 K10405 - gmx:100818140 1216.45