Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g01722 ATGGCTACTACAAATTCATCGAATCACTTTGCCGAAATCTCCAACGACGTTTTCATGGCTTCTTCTTCAACAACCTTCATGGCCATCCTCCTCCTTTTCTTGTACTTCCATTCTTCGGCGGCGCTCCCCCTCTCCGTGGAGAGACCCGACGAAGACGTGATAGTTTCGTCGCCGAAGGGGACGTTCACGGCGGGGTTCAGGCGCGTGGGGGAGAACGCGTACTGCTTCGGCGTGTGGTTCTCGCAGGCGGAGAAGCACGTGGTGTGGATGGCCAACCGCGACATTCCGGTGAACGGGAAACGCTCCTCGCTCTCCCTCCTCAAGAACGGCAACCTCGTGTTGTCCGACGCCGGACAGTTCGACGTTTGGGACACCAAGACTCTGTCGGAGAAGCCGTTGGAGTTGCATTTGCACGACACCGGGAACCTCGTGCTCCGGGAACAGACCAATAGAAGCTCTGTTTTGTGGCAAAGCTTTGATTTTCCCACCGATACACTCCTCCCAGGCCAGCTTCTCACCAGGTTCACGAAGCTTGTTTCGGCGAGAAGTGAGGGCAACTATTCCTCTGGGTTCTACAAGCTCTTCTTCGACAACGACAACGTTTTCCGTCTTCTGTACGAGGGTCGTGAAGTTTCAAGCGTTTACTGGCCGGATCCTTGGCTGGTTAGCAACAACGTTGGGTTCGGTAACGGAAGAACCTCGTACAACAGTAGCAGAGTTGCAGTTCTAAATGACTTGGGCCAATTCAGTGTTTCTGATAAATTCAGTCTCACCACAATCGATCATGGGTTACTCCTTCAACGAAGGTTGACCCTTGACTATGATGGCAATGTTCGTATCTACAGCAGAGAAAATGGTCAACAAGATTGGTCCATGGCAGGGCAATTCAAGTCACAACCTTGTTTCATTCATGGGATTTGTGGTCCGAACAGTATATGCAGTCATGACAAAGCAATTGGTAGAAAGTGTGATTGTCTTGAAGGGTATAGCTGGGTCGATAGCCAAGATTGGTCTTTGGGTTGCAAACCAAATTTCCAACTTACCTGTGATAACAAGACAGAATATCGCGCTGTACCTCTCTACGAAGTGGATTTTTATGGATATGACTATGGAACTTCCTTTGAAAACTACACATATAAACAATGTGAGAAACTGTGCTTGGAAGTGTGTGAGTGCATGGGTTTTCAGTACAGCTTTGCTGTAGAAAATGGCCACTTTTGGTGCTACCCAAAGACGCAGTTGCTAAATGGACACCATTCACCCGGTTTCCCAGGACAATTTTTCGTGCGTCTGCCAAAAGAAACCGCTCAAGAAAACCACCTGCAAAACAACAATGGCTTGGCTTGTCCGAGAAATGCAGAAAAACTACTCGAAAGACCGTATGTGAAAGGCAAGGAAAACGGGTCTGTGAAGTTCGTGCTTTGGTTTGCAGTTGGGTTAGGAGGGTTTGAGGCTGTGTGCATCTTTCTGGTGTGGTGTTTCTTGTTCAGGAGTAGCAACCATTTGGTGAGTGCAGACCAACAAGGGTATGTTCTTGCTGCAGCCACAGGGTTCAGAAGGTACACGTACTCTGAACTGAAACAAGCCACAAAGGGTTTCAGCGAAGAGATTGGAAGGGGTGCGGGAGGGACAGTGTACAAGGGTGTGTTATCAGATAACAGAGTTGCAGCGATAAAAAAGCTGCATGAGTTTGCGGAGCAAGGAGAGAGTGAGTTTCTGACTGAGATGAGCATCATTGGGAGGCTGAATCACATGAACTTAATCGGCATGTGGGGGTATTGTGTGGAAGGAAAACACAGGATTCTGGTTTATGAGTACATGGAAAACGGGTCTTTGGCTAATAATCTTCCATCGAATTCACTTGATTGGAGGAAGAGGTACAACATTGCAATGGGAATGGCAAAGGGTTTGGCCTATTTACATGAAGAGTGTTTGGAGTGGATCCTGCACTGTGATATCAAGCCTCAAAACATTCTTCTTGACTCCGATTACCAACCCAAGGTGGCTGATTTTGGCTTGTCCAAGCCCTTGAACAGAAACAACCTCAACAACTCAAGCTTTTCCAGAATAAGAGGCACAAGGGGTTACATGGCACCAGAATGGGTTTTCAACTTGCAAATCACTTCCAAGGTGGATGTTTACAGCTATGGAATTGTTGTGTTGGAGATGATAACTGGGAGGAGTCCAATGATCGGTGTTCAAGTCACAGAACTAGGGCAAGAGTCGCAAAATGAGAGGTTGGCAACATGGGTGAGGGAGAAAAGAAAGAAAGCACCAGAAGGAACATGTTGGGTGGAACAAATTGTTGACCCCACTTTAGGATCAGATTACAACTTGAAGCGGATGGAGATTTTGGCAACAGTGGCTTTGGAATGTGTTGAGGAAGACAAAGATGTGAGACCTAGCATGAGTCAAGTCGTTGAAAGACTCCAAAACGGTTCTTGA 2445 0.4744 MATTNSSNHFAEISNDVFMASSSTTFMAILLLFLYFHSSAALPLSVERPDEDVIVSSPKGTFTAGFRRVGENAYCFGVWFSQAEKHVVWMANRDIPVNGKRSSLSLLKNGNLVLSDAGQFDVWDTKTLSEKPLELHLHDTGNLVLREQTNRSSVLWQSFDFPTDTLLPGQLLTRFTKLVSARSEGNYSSGFYKLFFDNDNVFRLLYEGREVSSVYWPDPWLVSNNVGFGNGRTSYNSSRVAVLNDLGQFSVSDKFSLTTIDHGLLLQRRLTLDYDGNVRIYSRENGQQDWSMAGQFKSQPCFIHGICGPNSICSHDKAIGRKCDCLEGYSWVDSQDWSLGCKPNFQLTCDNKTEYRAVPLYEVDFYGYDYGTSFENYTYKQCEKLCLEVCECMGFQYSFAVENGHFWCYPKTQLLNGHHSPGFPGQFFVRLPKETAQENHLQNNNGLACPRNAEKLLERPYVKGKENGSVKFVLWFAVGLGGFEAVCIFLVWCFLFRSSNHLVSADQQGYVLAAATGFRRYTYSELKQATKGFSEEIGRGAGGTVYKGVLSDNRVAAIKKLHEFAEQGESEFLTEMSIIGRLNHMNLIGMWGYCVEGKHRILVYEYMENGSLANNLPSNSLDWRKRYNIAMGMAKGLAYLHEECLEWILHCDIKPQNILLDSDYQPKVADFGLSKPLNRNNLNNSSFSRIRGTRGYMAPEWVFNLQITSKVDVYSYGIVVLEMITGRSPMIGVQVTELGQESQNERLATWVREKRKKAPEGTCWVEQIVDPTLGSDYNLKRMEILATVALECVEEDKDVRPSMSQVVERLQNGS 814
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g01722 814 SMART serkin_6 531 808 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun10g01722 814 ProSitePatterns Serine/Threonine protein kinases active-site signature. 648 660 IPR008271 GO:0004672|GO:0006468
Viun10g01722 814 CDD STKc_IRAK 537 812 - -
Viun10g01722 814 CDD PAN_AP_plant 345 432 - -
Viun10g01722 814 CDD B_lectin 56 162 IPR001480 -
Viun10g01722 814 Pfam Protein kinase domain 534 808 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun10g01722 814 PIRSF SRK 15 814 IPR024171 GO:0004674
Viun10g01722 814 Gene3D - 48 160 IPR036426 -
Viun10g01722 814 FunFam S-receptor-like serine/threonine-protein kinase 499 606 - -
Viun10g01722 814 FunFam Serine/threonine-protein kinase 607 814 - -
Viun10g01722 814 SMART blect_4 45 162 IPR001480 -
Viun10g01722 814 SUPERFAMILY Protein kinase-like (PK-like) 515 810 IPR011009 -
Viun10g01722 814 ProSiteProfiles Bulb-type lectin domain profile. 38 158 IPR001480 -
Viun10g01722 814 ProSiteProfiles Protein kinase domain profile. 531 814 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun10g01722 814 Gene3D Phosphorylase Kinase; domain 1 498 606 - -
Viun10g01722 814 PANTHER OS07G0415500 PROTEIN 26 811 - -
Viun10g01722 814 Pfam S-locus glycoprotein domain 266 330 IPR000858 GO:0048544
Viun10g01722 814 SUPERFAMILY alpha-D-mannose-specific plant lectins 76 217 IPR036426 -
Viun10g01722 814 Pfam D-mannose binding lectin 87 173 IPR001480 -
Viun10g01722 814 ProSitePatterns Protein kinases ATP-binding region signature. 537 560 IPR017441 GO:0005524
Viun10g01722 814 Gene3D Transferase(Phosphotransferase) domain 1 607 814 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g01722 Viun-Chr10 32382274 32385158 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g01722 521 810 Trihelix Transcription Factor Family AT5G38560 43.390 1.66e-67 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Viun10g01722 Pkinase 4.1e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g01722 - - gmx:100806357 1398.26