Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g01721 ATGAATTATAAGCCTAAGATGTCACTATGTTCATGCAGAAACTTTCCTGCTCCTTTTCTCTGGTTTCCATTGTTGCTCATTCTGCTCAGCAATGCTTCAGCTGATGCTGTCAAACAAAAGAACTTTTACATTGTTTTCCTGGGAGATCATGCTGGGAGTAGAGACATAGCACTAGACACCCATTTAAATATTCTCTCTGCTGTTAAAGGAAGCATCTTAGAAGCCAAAGAATCCATGGTATACAGCTACACAAAGAGCTTTAATGCATTTGCTGCTAAACTGTCCAAGGATGAAGCTAAGAACTTATCTGCCATGGATGAAGTGGTTTCTGTTATCCCTAATCAGTACCGCAAGCTACACACAACAAGATCATGGGACTTCATAGGATTACCTTTGACTGCTAAGAGAAAACTGAAATCAGAAAGTGACATAATTGTGGCACTTTTGGATACAGGGGTCACTCCTCAGCTTCAAAGCTTCAAGGACGATGGATTTGGTCCTCCACCTGCTAAATGGAAAGGAACTTGTGATAAACATGCAAATTTTTCAGGCTGCAATAACAAGCTCATAGGAGCCAGATACTTCAAGATTAGTGGAAAGCCTGATCCATCTGACATATTAGCCCCCATAGATGTGGTTGGTCATGGAACTCATACTGCATCAACAGCAGCAGGAACTGTTGTCCCAGATGCAAGTCTCTTTGGCATAGCCAAAGGCATGGCTCGTGGTGCTGTGCCATCAGCAAGGTTGGCAGTTTACAAAGTCTGCTGGGCAAGTGATGATTGTGCAGACATGGACATACTTGCAGCATTTGAAGCTGCTATACATGATGGTGTTGATGTCATATCCATTTCCATTGGTGGAGGGAATCCAAACTATGTGCAGGACTCTATAGGAATTGGATCATTTCATGCCATGAGAAAAGGCATAATCACTGTGGCCTCAGGTGGAAATGATGGACCATTCATGGCAACTGTTGCAAATACTGCACCATGGATTGTAACAGTGGCCGCTAGTGGCATTGATAGGGATTTCAGGAGCACCATTCAGTTGGGGAATGGAAAGAATTTCTCTGGGGGAGGGCTGACCACCTTCAATCCAAAACAAAAACAGTATCCCCTTGTCAATGGGACTGATGCAGCCAGAAACTCTGGAAGCAAGGAAAATGCTAGGTTCTGCTTTGAAGGCTCCTTGGATCCAAATAAGGTGAAAGGAAAACTTGTATACTGTAGTTTAAGTGGCTGGGGCAGTGAATCTGTTGTGAAAGGAATTGGTGGCATTGGTACTATAATGGAAAGTGACCAAGTGTTTGATATTGCCCAAATATTCATGGCTCCTGCTACCATAGTGAATAGTAGCATAGGTCAAATTATTATGAATTATACACACTCCACAAGATCACCATCTGCAGTAATACATAAGACACATGAAGTAAAGATTCCAGCTCCATTTACTGCTTCATTTTCATCTAGGGGTCCAAATCCAGCATCTAAACATATTCTAAAGCCTGATATTACAGCTCCTGGCCTTAACATCTTGGCATCTTATACACCTATGAAGTCAATTACTGGAGAGAAAGGAGATACTCAATTTTCAGAATTTACACTTATGTCTGGAACTTCTATGTCATGCCCTCATGTTTCTGGTGTAGCAGCATATGTGAAATCATTTCACCCAGATTGGTCTCCTGCTGCAATCAGATCAGCCATTATTACCACAGCTAAACCTATGAGCCAGAGAGTTAACAAGGAGGCAGAATTTGCCTATGGTGCTGGTCAAGTGAACCCTACAAGAGCAGTGAACCCTGGTTTGGTGTATGACATGGATGACTTTGCATATATCCAGTTCTTATGCCATGAGGGCTATAATAGTTCCACTCTATCAGTGTTAGTAGGCTCTCCTGTGAACTGCACCTCTTTGCTTCCAGGACTTGGCCATGATGCTCTCAACTATCCCACCATGCAACTAAGTGTGGAAAACAACTCAGGCACAACAGTAGGAGTTTTCAGGAGAAGAGTTACCAATGTTGGTCCTGCTCCAACCATCTTCAATGCCACCATCAAATCTCCCAAAGGAGTGGAAATCACAGTGAAACCTACAAGCCTCAATTTCTCTCATACTCTGCAGAAGAAAAGCTTCAAGGTAGTGGTGAAAGCAAAATCTATGGCAAGCATGAAAATTGTGTCAGGTTCCCTTATTTGGAGAAGCACACGTTACATTGTTAGGAGCCCTATTGTTATCTATAGTCCATAA 2253 0.4252 MNYKPKMSLCSCRNFPAPFLWFPLLLILLSNASADAVKQKNFYIVFLGDHAGSRDIALDTHLNILSAVKGSILEAKESMVYSYTKSFNAFAAKLSKDEAKNLSAMDEVVSVIPNQYRKLHTTRSWDFIGLPLTAKRKLKSESDIIVALLDTGVTPQLQSFKDDGFGPPPAKWKGTCDKHANFSGCNNKLIGARYFKISGKPDPSDILAPIDVVGHGTHTASTAAGTVVPDASLFGIAKGMARGAVPSARLAVYKVCWASDDCADMDILAAFEAAIHDGVDVISISIGGGNPNYVQDSIGIGSFHAMRKGIITVASGGNDGPFMATVANTAPWIVTVAASGIDRDFRSTIQLGNGKNFSGGGLTTFNPKQKQYPLVNGTDAARNSGSKENARFCFEGSLDPNKVKGKLVYCSLSGWGSESVVKGIGGIGTIMESDQVFDIAQIFMAPATIVNSSIGQIIMNYTHSTRSPSAVIHKTHEVKIPAPFTASFSSRGPNPASKHILKPDITAPGLNILASYTPMKSITGEKGDTQFSEFTLMSGTSMSCPHVSGVAAYVKSFHPDWSPAAIRSAIITTAKPMSQRVNKEAEFAYGAGQVNPTRAVNPGLVYDMDDFAYIQFLCHEGYNSSTLSVLVGSPVNCTSLLPGLGHDALNYPTMQLSVENNSGTTVGVFRRRVTNVGPAPTIFNATIKSPKGVEITVKPTSLNFSHTLQKKSFKVVVKAKSMASMKIVSGSLIWRSTRYIVRSPIVIYSP 750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g01721 750 ProSitePatterns Serine proteases, subtilase family, serine active site. 539 549 IPR023828 -
Viun10g01721 750 FunFam Subtilisin-like protease SBT5.3 31 120 - -
Viun10g01721 750 ProSiteProfiles Serine proteases, subtilase domain profile. 124 600 - -
Viun10g01721 750 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 75 746 IPR045051 -
Viun10g01721 750 Gene3D - 342 478 - -
Viun10g01721 750 SUPERFAMILY Subtilisin-like 119 604 IPR036852 GO:0004252|GO:0006508
Viun10g01721 750 CDD Peptidases_S8_3 118 574 IPR034197 -
Viun10g01721 750 FunFam Subtilisin-like protease SBT1.5 143 363 - -
Viun10g01721 750 Gene3D Peptidase S8/S53 domain 143 610 IPR036852 GO:0004252|GO:0006508
Viun10g01721 750 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 29 120 IPR037045 -
Viun10g01721 750 Pfam Fibronectin type-III domain 649 747 IPR041469 -
Viun10g01721 750 Pfam Peptidase inhibitor I9 43 120 IPR010259 -
Viun10g01721 750 CDD PA_subtilisin_like 348 472 - -
Viun10g01721 750 Gene3D - 617 749 - -
Viun10g01721 750 PRINTS Subtilisin serine protease family (S8) signature 141 160 IPR015500 -
Viun10g01721 750 PRINTS Subtilisin serine protease family (S8) signature 211 224 IPR015500 -
Viun10g01721 750 PRINTS Subtilisin serine protease family (S8) signature 538 554 IPR015500 -
Viun10g01721 750 Pfam Subtilase family 142 592 IPR000209 GO:0006508|GO:0008236
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g01721 Viun-Chr10 32375963 32380976 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g01721 32 588 Subtilisin-like Serine Gene Family AT4G00230 64.273 0.0 724
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g01721 - - ccaj:109800351 1286.55