LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Viun10g01704	ATGTCAGAAGCAGCAGCACCTTCAATTTCTTCATCCGCCATGGATCCTTTCGAATTCCTCAAAATCAAACTCAACCCTGACGGTTCTCTCACCAGAAACTACGTCGTTCCCACGGTTCCTCCTTCCCTGACACCCCCCACTTCCGAACCCTCTCTTTCCGTCGACATCCCTCTCAATGCCGCCACCAACACCTCCCTCCGCCTCTTCCTCCCGCACCCTCCGCCCGCCCAAAAACTCCCCCTCATCCTCTACTTCCACGGCGGCGGATTCATCCTCTACCACCCCTCCTCCTTCATCTTCCACCACTCCTGCACCCCTCTCGCCGCCTCCCTCCCAGCCGTCATCGCCTCCGTGGACTACCGCCTCAGCCCCGAACACCGCCTCCCGGCCGCCTACGACGACGCCCTCGACGCCCTCCTCTGGGCCCAGGATCAGGCCCGTGACCCAGCCCAGGCCCATCCCTGGCTCAGCGACCACGTGGACTTCTCCAAGTGCTTCCTTATGGGAAGCAGTGCCGGGGGAAACATCGCCTACTTTGCAGCGCTCCGTGCACTCGACCACGATCTCTCCCCTCTCAAAATCCTCGGAATCGTGATGAACGCTCCCTATTTCAGTGGGTCCCAGCGCTCTGACTCTGAACTCCGTCTCGTTAACGACCGTATCTTGCCGTTACCCGCTAACGACCTCATGTGGTCCCTCTCGCTCCCCGAGGGCGCGGATCGCGACCACGTGTACTGCAATCCGACGGCGGCGGATGCAGCTCACGGCGACAAGATCGGACGGCTGCCCGCGTGTTTCATCAACGGCTACGGTGGAGATCCCTTGGTGGACAAGCAGAAGGAGTTGGCGAGGATTTTGGAGGCGCGTGGCGTGCGCGTGGAGAAACGGTTCGTGGAGGACGGGTACCATGCTGTGGAGATCTTTGATGAAACTAAGGCTATCGCTTTGGCCCAAAATATTAAGAACTTCGTCCTCTCTCTTACTTCTCAATCTTCTATTTGA	1002	0.5908	MSEAAAPSISSSAMDPFEFLKIKLNPDGSLTRNYVVPTVPPSLTPPTSEPSLSVDIPLNAATNTSLRLFLPHPPPAQKLPLILYFHGGGFILYHPSSFIFHHSCTPLAASLPAVIASVDYRLSPEHRLPAAYDDALDALLWAQDQARDPAQAHPWLSDHVDFSKCFLMGSSAGGNIAYFAALRALDHDLSPLKILGIVMNAPYFSGSQRSDSELRLVNDRILPLPANDLMWSLSLPEGADRDHVYCNPTAADAAHGDKIGRLPACFINGYGGDPLVDKQKELARILEARGVRVEKRFVEDGYHAVEIFDETKAIALAQNIKNFVLSLTSQSSI	333

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Viun10g01704	333	Pfam	alpha/beta hydrolase fold	82	305	IPR013094	GO:0016787
	Viun10g01704	333	PANTHER	ARYLACETAMIDE DEACETYLASE	32	304	-	-
	Viun10g01704	333	Gene3D	alpha/beta hydrolase	17	330	IPR029058	-
	Viun10g01704	333	SUPERFAMILY	alpha/beta-Hydrolases	33	319	IPR029058	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Viun10g01704	Viun-Chr10	32122791	32124044	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Viun10g01704	22	311	Carbohydrate Esterase	AT5G16080	36.789	5.18e-52	173

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Viun10g01704	-		-	gmx:100814398	501.516