Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g01692 ATGAACAATGAAACGACTCGCGCAGGGAAGAAGAGTAAGGAACAGTTCTGTTGTATTTCTCACGAATTCTTTCGAACAGCGTACGCAAACCCTAACAAAATCGCAGTGATTCACGCTACCGGCGGGGCGCACCTTTGCCGGGAGTTTCGCCGCGAAAATTCTGCCACCACCGACTTCAACGGCGACATTGCCACCCTCTTAGAGAAGCACGTCGAGTCCATATCTCCGCCATTTTACGACGGGGACCGGTGCTTCACTTACTCTCATGTCTTGGATGCGGTTCGTTCCCTCAGCTCACGCCTCCGCTCTATCCTGCTTGGTGGGGATGACCCACACTTGATCACTGCACAATCTCCAGGTAGCAATGGTGTCAACCGTGAAAAGAGAACTGTACAGAAACCTGAGTCCTTGGAAACTGTCATGCCCAGTGAAGAGGCGTTGGCTGAATCAAGTGAAGAGTATAGGCCAAAGATAGTGGGGATTTATATGCCTCCTTCTGTTGAATATATTGTAGCTGTCCTTTCGGTACTTAGGTGTGGGGAAGCCTTCCTGCCTCTGGATCCGTTTTGGCCAAATGAAAGGATATTGTTTGTTGCCTCTTCTTCAAATGTTGATCTCATTATAGGATCCCAATCTTCTTTTGGTAAAAGAAATTTGGAGAAGCTTGATGAATCACATTGGCTGGTAAAGTCAAGTAGTTGTCCCGTTTTGAATTACTCCATTGACCAAAAACTACTAGATTGTAGTGGTCCAACAAATTTAGCATGGCCATGTGCCAATGAAAAACAAAGATCATTCTGCTATGTGTTGTACACATCTGGATCAACTGGAAAACCCAAGGGAGTGTGTGGCACCGAACAAGGTCTTTCTAATCGCTTTTCATGGATGCAAGGAATGTATCCTCTGAATGGACAGGAACTGTTGTTGTTTAAGTCATCAGTTAGCTTCATTGATCACCTACAAGAATTTCTCAGTGGTATTTTGACTGCTTGTGTATTGGTTATTCCTCCTTTCAACGAGCTAAAAGAAAATTTGTATTCTATTATAGATTTCCTGCAGGCATATTTTATTAATAGGCTCACGGCTGTTCCATCACTAATGAAGACTATTCTTCCTGGATTGAAAACCAATGCTAACATGGCGGTTGAAAATTCACTGAAATTGCTTGTGCTTAGTGGTGAAACTTTTTCTTTGACCTTGTGGGAGATTCTTTCAACTATATTACCGAAGACATCAATCTTGAATTTATATGGAAGCACTGAGGTCTCTGGTGACTGTACATATTTTGATTGCAAGAGAATGCCATTGATTTTTAAGGAAGAAAGGCTAACCAGTGTTCCAATAGGTTTACCCATTCCTAACTGTGATGTGATTCTTCTTAGTGAAAATGGTGCATCAAATGAGGGAGAGCTATATGTTGGTGGTCATTGCATCTTTAGGGGTTACTACAATGAATTTAAGGAAATGTCTTATGCATTTGCAAAGTTGCTTCCACGTTACAGTTGTGGTGATTTTGTTAAAGGATGCCAAGATCAATTATACTTTAGAACAGGTGATTTAGTCAAACAGTTGCCTAGTGGTGACTTTGTATTTTTGGGAAGAAAAGATCGCATTGTAAAAATCAACGGACAGCGAATTGCCCTAGAAGAGGTTGAAGATTTGTTAAGAAAGCATCCACATATAAACGATGCTGCTGTAGTTTGTCGAAATAATAAAGCAGAACTTATGCTTGTTGAAGCCTTTATCATACTGAAGAAAAAAGAAAGCTTGGGTGAATCATTAGTACCTGCAATCAGAAGTTGGATGATGAACAAACTTCCTTCTGTTGTACTTCCCAATCGTTTCTTCTTCATAGAATCATTCCCCCTGTCTTCTAGTGGTAAGGTTAATTATGAGTTATTGGTTGGCTCAGAATTATTGACAAAGAATGTCAAAGATGAAGTTGGTAACATTGATTGCGGCAATCTTTTGCAACTTATTAAAAAGGCATTTCATGATGCTTTGATGATTGAAAAGGTTTGTGATGTTGATGATGATTTCTTTATGATGGGCGGTAACTCTCTTTCTGCTGCACATGTTGCTTACAGTTTGGGGATTGACATGAGATTTCTTTACTACTATCCAAGTGCTCTTAAGCTTTGCATGGCTCTTCTCCAAAAAAAAGGATCTTGCACTTTGCATAACAGTCTGGACTGTTGTTTGCAAATAAACACAGACAGACAAGATAACCATATTTCTACTAATCATACTGAAAATTCTAGTCCTCTTGAGTCTAGGATGACATCCAAAGATAACAATGATGGTCCTATTCCTTCTAAACGTTTAAAGAGGGGTTTGACCAATGTTACATCATGGGATGATGAATCACTCCCATGGTATTCCCCTTCACTATTATCATTCTCATTGAACCGATGCAACAAGGTGTTGCATAAAGGACAGCTGCAAGTAATTGATATGCACCAAAATACTTGGTTTGCAGACATTCCAAGAGGCAACAGAGGTCACATGAAAGACTTTTGGAAAGTTTACATGGAATCTTGTGTCGATGCTTCACCGATGCTTGTGTTTAAAGGCACACACATTTATTTGTTCATTGGATCTCACTCTCATAAATTTCTCTGCATAAATGCTAGAAGTGGTTCTGTCCAGTGGGAGATCAAACTAGAAGGGCGCATTGAAAGTACAGCAGCAATTGTTTCTGATTTTTCCCAGGTTGTTGTTGGTTGTTACAATGGAAAAATATATTTTCTTGATTTTTTGAATGGACACATCTGTTGGATTTTCCAAACTTCTGGTGAGGTAAAATCACAGCCGGTTGTAGACAAACGCAGACAATTGATCTGGTGTGGCTCACATGATCGTAACTTATATGCTCTTGATTACAAAAAGCATTGCTGTGTGTTCAAGCTACCATGTGGAGGCAGTATATATGGGTCACCTGCAATTGATGAGGCTCGTGACTTGCTTTATGTGGCGTCCACTGGTGGTCGTATCACAGCTATATCAATATCGGCTTCTCCTTTTACTATTTTGTGGCTAAATGAATTAGAAGTTCCTGTGTTTGGTTCTCTTGCAGTCGCCCACAATGGAACTGTGATATGTTGCTTGGTGGATGGTCATGTTTTTGCATTGAGTCCAAATGGCTCCATTGTTTGGAAGAAAACAACTGATGGTCCAATATTTGCTGGGTCATGCATACCTTCTGTTCTTCCTGATGAGGTGCTTGTATGCTCCAGAAGCGGTAGTGTATACTCATTCAAACTGGAGGAGGGGGACCTACTATGGGAATACAATGTTGGACATCCAATTACAGCATCTGCTTATGTCGACGAGCACTTGCTGCTGGAGTCTGATGCTTCCAATTCCTCGGACAGGTTAATTTGCATTTGTTCCAGTTCTGGAGGCATACACCTTCTTCGAGTGAACATGAATACTAATTCCTCCAAAGATGCTTATCAACAAAGAAGCTATGTGGAAGAATTTGCAAGGCTAAACTTGGCAGGGGATATATTCTCTTCACCTTTAATGATTGGTGGTCGGATTTTTGTTGGTTGTCGAGATGACTACTTGCATTGTATTGCCCTTGAAATTCCAAAACAACATGAAACTTAA 3612 0.4061 MNNETTRAGKKSKEQFCCISHEFFRTAYANPNKIAVIHATGGAHLCREFRRENSATTDFNGDIATLLEKHVESISPPFYDGDRCFTYSHVLDAVRSLSSRLRSILLGGDDPHLITAQSPGSNGVNREKRTVQKPESLETVMPSEEALAESSEEYRPKIVGIYMPPSVEYIVAVLSVLRCGEAFLPLDPFWPNERILFVASSSNVDLIIGSQSSFGKRNLEKLDESHWLVKSSSCPVLNYSIDQKLLDCSGPTNLAWPCANEKQRSFCYVLYTSGSTGKPKGVCGTEQGLSNRFSWMQGMYPLNGQELLLFKSSVSFIDHLQEFLSGILTACVLVIPPFNELKENLYSIIDFLQAYFINRLTAVPSLMKTILPGLKTNANMAVENSLKLLVLSGETFSLTLWEILSTILPKTSILNLYGSTEVSGDCTYFDCKRMPLIFKEERLTSVPIGLPIPNCDVILLSENGASNEGELYVGGHCIFRGYYNEFKEMSYAFAKLLPRYSCGDFVKGCQDQLYFRTGDLVKQLPSGDFVFLGRKDRIVKINGQRIALEEVEDLLRKHPHINDAAVVCRNNKAELMLVEAFIILKKKESLGESLVPAIRSWMMNKLPSVVLPNRFFFIESFPLSSSGKVNYELLVGSELLTKNVKDEVGNIDCGNLLQLIKKAFHDALMIEKVCDVDDDFFMMGGNSLSAAHVAYSLGIDMRFLYYYPSALKLCMALLQKKGSCTLHNSLDCCLQINTDRQDNHISTNHTENSSPLESRMTSKDNNDGPIPSKRLKRGLTNVTSWDDESLPWYSPSLLSFSLNRCNKVLHKGQLQVIDMHQNTWFADIPRGNRGHMKDFWKVYMESCVDASPMLVFKGTHIYLFIGSHSHKFLCINARSGSVQWEIKLEGRIESTAAIVSDFSQVVVGCYNGKIYFLDFLNGHICWIFQTSGEVKSQPVVDKRRQLIWCGSHDRNLYALDYKKHCCVFKLPCGGSIYGSPAIDEARDLLYVASTGGRITAISISASPFTILWLNELEVPVFGSLAVAHNGTVICCLVDGHVFALSPNGSIVWKKTTDGPIFAGSCIPSVLPDEVLVCSRSGSVYSFKLEEGDLLWEYNVGHPITASAYVDEHLLLESDASNSSDRLICICSSSGGIHLLRVNMNTNSSKDAYQQRSYVEEFARLNLAGDIFSSPLMIGGRIFVGCRDDYLHCIALEIPKQHET 1203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g01692 1203 Pfam PQQ enzyme repeat 905 939 IPR002372 -
Viun10g01692 1203 Gene3D - 127 535 IPR042099 -
Viun10g01692 1203 Pfam AMP-binding enzyme C-terminal domain 550 628 IPR025110 -
Viun10g01692 1203 PANTHER BETA-ALANINE-ACTIVATING ENZYME 15 1196 - -
Viun10g01692 1203 ProSitePatterns Putative AMP-binding domain signature. 269 280 IPR020845 -
Viun10g01692 1203 CDD A_NRPS 155 634 - -
Viun10g01692 1203 Pfam PQQ-like domain 986 1185 IPR002372 -
Viun10g01692 1203 Gene3D - 969 1197 IPR015943 GO:0005515
Viun10g01692 1203 FunFam Putative acyl-activating enzyme 19 1006 1196 - -
Viun10g01692 1203 FunFam Putative acyl-activating enzyme 19 826 1005 - -
Viun10g01692 1203 SUPERFAMILY Acetyl-CoA synthetase-like 79 635 - -
Viun10g01692 1203 MobiDBLite consensus disorder prediction 744 768 - -
Viun10g01692 1203 MobiDBLite consensus disorder prediction 744 773 - -
Viun10g01692 1203 Pfam AMP-binding enzyme 158 541 IPR000873 -
Viun10g01692 1203 Gene3D - 864 968 - -
Viun10g01692 1203 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 840 1140 IPR011047 -
Viun10g01692 1203 SMART ire1_9 852 887 IPR018391 -
Viun10g01692 1203 SMART ire1_9 1067 1098 IPR018391 -
Viun10g01692 1203 SMART ire1_9 1024 1055 IPR018391 -
Viun10g01692 1203 SMART ire1_9 896 929 IPR018391 -
Viun10g01692 1203 Gene3D - 536 641 IPR045851 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g01692 Viun-Chr10 31939714 31957637 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g01692 262 629 Monolignol Biosynthesis Gene Families AT4G19010 23.822 3.51e-16 81.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g01692 K00142 - gmx:100820175 1994.55