Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g01682 ATGTTTTTCAGTCTCTCCTTTTCCGGTGTCCCCAAGAGAAGCAAAACAATGGAGTACCTTCTTCCACTTCTTCTGATCACCATAGTGTGTGTAACCATTCATGTACTCATCTCAACCTTCAAACCAAAGAAAACCTCAAAATACCCTCCAGGGCCTCGCCCTCTTCCCATCATCGGAAACATCTTGGACCTTGGAATCCTTCCTCACCAAACACTTGCAAAACTTTCTAAAATTTATGGTCCTATAATGAGTCTGAAGCTTGGTAGCACCACCACCATAGTCATTTCATCTCCACATGTTGCCAGAGAAGTACTGCAAAAAAATGATCAAATCTTTTCCAACAGGACAATCCCAGATACTGTTCGAGTTCTTGATCATCACATACTTTCAGTTGCGTGGATTCCACCTTCTGCACAGTGGAGGATCCTCAGGAGGGCTTGTGCTACCAAAGTCTTCTCTTCTAAGCAGCTTGATTCTACCCAAGTTCTTCGCCAGGGTAAGGTGCAAGAGTTGATGGATTATGTGAAGGGAAGATGTGAGAAAGGTGAAGCCTTGGATATTGGTGAGGCTTCCTTCACAACTGTACTTAATTCCATATCAAACACTTTCTTCTCAATGGATTTTGCTCATTACGCTTCTGACAAGTCTCAAGAGCTCAAGGACGTCATTTGGGGTATCATGGAAGAAGCTGGAAGGCCTAATGTTGTTGACTTTTTTCCAATCTTTCGCATGCTTGATCCACATGGTGCTCGGAGAAGAATGAATGGTTACTTTGGAAAGTTACTTGCGTTTTTTGATGGACTCATAGATGAAAGATTGCGTTTAAGGGCATTGGAAAAAGAAGGCACGACATGCAAGGACGTGTTGGATTCTGTGTTGGAACTTATGCTTGAAGACAACTCACAACTCACTCGTCCCCATGTTCTGCATCTGTTTCTAGATTTATTTGTGGCTGGGATAGACACAACAGCAAGCTCAATAGAATGGGTGATGGCTGAGTTGCTGCATAATCCAGAAAAACTAGAGAAAGTTAGAAAAGAGGTTCAAACCCTTGGCAAAGGTGAACAAGTAAAAGAATCAGATATCTCAAAGCTTCCTTACCTGCAAGCAGTTGTGAAGGAAACCTTTCGTCTACATCCACCCATCCCAATGTTACTGCCACACAAGCCAGAAGTTAATGTTGAAATATGCAATTTCATGGTGCCTAAAAGTGCACAAATTCTTATTAATGTGTGGGCCATGGGAAGAGAGTCAAGTATTTGGACAAACCCAAATGAATTTAGACCTGAAAGATTTTGGGAAAGTGACATTGATTTTAAAGGGAAAGATTTTGAGTTAATACCCTTTGGAGCTGGAAGAAGGATGTGTCCTGGGTTGCCTATGGCTTCTAGAACTATTCACATTGTGTTAGCCTCTCTTCTATGCAATTATGATTGGAAGCTCAAGGATGGAGAAAAGCATGAGGAATTGGATATGTTAGAGAAATCTGGGTTGACCTCGCACAAGGCTCAACCTCTTTTGGTTATTCCCATCCAAGCATAA 1542 0.4196 MFFSLSFSGVPKRSKTMEYLLPLLLITIVCVTIHVLISTFKPKKTSKYPPGPRPLPIIGNILDLGILPHQTLAKLSKIYGPIMSLKLGSTTTIVISSPHVAREVLQKNDQIFSNRTIPDTVRVLDHHILSVAWIPPSAQWRILRRACATKVFSSKQLDSTQVLRQGKVQELMDYVKGRCEKGEALDIGEASFTTVLNSISNTFFSMDFAHYASDKSQELKDVIWGIMEEAGRPNVVDFFPIFRMLDPHGARRRMNGYFGKLLAFFDGLIDERLRLRALEKEGTTCKDVLDSVLELMLEDNSQLTRPHVLHLFLDLFVAGIDTTASSIEWVMAELLHNPEKLEKVRKEVQTLGKGEQVKESDISKLPYLQAVVKETFRLHPPIPMLLPHKPEVNVEICNFMVPKSAQILINVWAMGRESSIWTNPNEFRPERFWESDIDFKGKDFELIPFGAGRRMCPGLPMASRTIHIVLASLLCNYDWKLKDGEKHEELDMLEKSGLTSHKAQPLLVIPIQA 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g01682 513 SUPERFAMILY Cytochrome P450 49 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g01682 513 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 25 512 - -
Viun10g01682 513 CDD CYP76-like 76 510 - -
Viun10g01682 513 Gene3D Cytochrome P450 37 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g01682 513 Pfam Cytochrome P450 49 500 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g01682 513 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 449 458 IPR017972 GO:0005506|GO:0016705
Viun10g01682 513 PRINTS P450 superfamily signature 370 381 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g01682 513 PRINTS P450 superfamily signature 447 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g01682 513 PRINTS P450 superfamily signature 318 335 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g01682 513 FunFam Cytochrome P450 76C4 40 509 - -
Viun10g01682 513 PRINTS E-class P450 group I signature 307 324 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g01682 513 PRINTS E-class P450 group I signature 327 353 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g01682 513 PRINTS E-class P450 group I signature 446 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g01682 513 PRINTS E-class P450 group I signature 100 121 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g01682 513 PRINTS E-class P450 group I signature 369 387 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g01682 513 PRINTS E-class P450 group I signature 456 479 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g01682 513 PRINTS E-class P450 group I signature 410 434 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g01682 513 PRINTS E-class P450 group I signature 76 95 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g01682 Viun-Chr10 31834551 31836589 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g01682 23 512 Cytochrome P450 AT2G45550 47.590 1.92e-169 487
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g01682 - - gmx:100809483 817.764