Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g01670 ATGGAAGCTAAGCCTCTTAGGATTGTTCCCTCTTCACACAACACTTCTGGAGGTGGACCCCGGAAGAAGATTGACATTGGACACGCGATGAGAAATGGTGGTGCTGCTGGTGGTGTTGATGTTGAGAGAAGGAGGGTTTTTATGGTCAAGGAAGAGAAAGAGAAAGAAAAAGAGTACTCTTCCAATAGTGTTGAACTTCATCTTGGGGTTGATGCTTCTCATTCTGCGCCACCAGAAATAAACCATGTGATCACTGAAGCTCAGAGGCGTGAGCTTCACCACCAAGTTTTCATCTTCAACCACTTGGCTTATAAACTTCCTCCTCCTCATCACCGTGTGCAATTCCCAAGCAACATGTCAGAATACAGTTTCCTTGGTTTTGATCATGGGAATGTGGTGGATCCAGAACCTCATAGGTGCAGAAGAACTGATGGAAAGAAATGGAGATGCAGTAAGAGTGTAGTGCCTGGTCAAAAGTACTGTGAAAGGCACATGCATAGAGGTAGAAATCGTTCAAGAAAGCCTGTGGAAACATCTCAAGTTAACTCTCCTTTGGCATCAAAACCTTGTGGCAAGTCACCTACCAAATCAGCCTCAAAGACAAGATTTGAAATTTCAAATCCAAACCTCACCATGGCAATGCAACCTAGTGAAACACCTTCCAGCACCCCATCAAGGAGCCTCAGCATTGACAATTGCTCTTCCATGAACAGGTCCCTCATGGTGTTTCCTTCGGCCTCTGCGGCGGCATTCCCGGGCTCCGGCCTTGCCACTGCCGGTGCTCCTAAGGCGGCGGATAACAAAAGTTGCCTAAAGATGTGCCAGAAAGATAACCAGTCCAAGAGCCGTGTCAGTAACAGCACAGGCAATAGAAGTGATGGGAAAGGAAGCATTGTTGTTGGTGATTCTAATAGCATCTCTACTGGAATAAGCTTCTCCCCAACAAGTGTTCTTCAAGTTTTTGGTAACAACCCTTCTTACGTGAATGACAAAACCAACAACACAGAATCTGCACCGGACCGGTGCCGGCGAACGGACGGCAAGAAGTGGCAATGCAAGAGTGTTGTTCTTCCTGGTCAGAAGTACTGTGCCACACACATGCACAGAGGTGCTAAAAAGCGTTTTGCAAGCCATGAAATAGCAGCAGCTGCTGCTACAACCACCACAACTACTTGTTCTGCCGTTACCATTGCGCGGTTGCCGAACTCTCCGGCCACAACCAACATGCAGAAAGAGGATTCCGCAATTCCAAGCACAAATCTTTCCATGTCAGTTCCAGCAAGTGCTCAATGCAATGGGAAAGGCTCTAGTAACAATGACACTGATACCACCATCAGTGACACCTTGCAAGAGTGTAGCTATACTTCTTTCTGA 1374 0.4694 MEAKPLRIVPSSHNTSGGGPRKKIDIGHAMRNGGAAGGVDVERRRVFMVKEEKEKEKEYSSNSVELHLGVDASHSAPPEINHVITEAQRRELHHQVFIFNHLAYKLPPPHHRVQFPSNMSEYSFLGFDHGNVVDPEPHRCRRTDGKKWRCSKSVVPGQKYCERHMHRGRNRSRKPVETSQVNSPLASKPCGKSPTKSASKTRFEISNPNLTMAMQPSETPSSTPSRSLSIDNCSSMNRSLMVFPSASAAAFPGSGLATAGAPKAADNKSCLKMCQKDNQSKSRVSNSTGNRSDGKGSIVVGDSNSISTGISFSPTSVLQVFGNNPSYVNDKTNNTESAPDRCRRTDGKKWQCKSVVLPGQKYCATHMHRGAKKRFASHEIAAAAATTTTTTCSAVTIARLPNSPATTNMQKEDSAIPSTNLSMSVPASAQCNGKGSSNNDTDTTISDTLQECSYTSF 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g01670 457 MobiDBLite consensus disorder prediction 1 26 - -
Viun10g01670 457 ProSiteProfiles WRC domain profile. 336 381 IPR014977 -
Viun10g01670 457 ProSiteProfiles WRC domain profile. 134 178 IPR014977 -
Viun10g01670 457 ProSiteProfiles QLQ domain profile. 83 118 IPR014978 GO:0005524|GO:0005634|GO:0006355
Viun10g01670 457 PANTHER GROWTH-REGULATING FACTOR 5 316 436 IPR031137 GO:0005634|GO:0006351|GO:0032502
Viun10g01670 457 MobiDBLite consensus disorder prediction 162 231 - -
Viun10g01670 457 MobiDBLite consensus disorder prediction 175 231 - -
Viun10g01670 457 Pfam WRC 339 376 IPR014977 -
Viun10g01670 457 Pfam WRC 135 177 IPR014977 -
Viun10g01670 457 MobiDBLite consensus disorder prediction 276 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g01670 Viun-Chr10 31631110 31634913 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g01670 321 370 GRF Transcription Factor Family AT2G22840 46.000 5.10e-09 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g01670 - - pvu:PHAVU_010G048400g 681.019