Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g01669 ATGGAAGCTAAGCCTCTTAGGATTGTTCCCTCTTCACACAACACTTCTGGGGTAGGAGGTGGACCCCGGAAGAAGATTGACATTGGACACGCGATGAGAAATGGTGGTGCTGCTGGTGGTGTTGATGTTGAGAGAAGGAGGGTTTTTATGGTCAAGGAAGAGAAAGAGAAAGAAAAAGAGTACTCTTCCAATAGTGTTGAACTTCATCTTGGGGTTGATGCTTCTCATTCTGCGCCACCAGAAATAAACCATGTGATCACTGAAGCTCAGAGGCGTGAGCTTCACCACCAAGTTTTCATCTTCAACCACTTGGCTTATAAACTTCCTCCTCCTCATCACCGTGTGCAATTCCCAAGCAACATGTCAGAATACAGTTTCCTTGGTTTTGATCATGGGAATGTGGTGGATCCAGAACCTCATAGGTGCAGAAGAACTGATGGAAAGAAATGGAGATGCAGTAAGAGTGTAGTGCCTGGTCAAAAGTACTGTGAAAGGCACATGCATAGAGGTAGAAATCGTTCAAGAAAGCCTGTGGAAACATCTCAAGTTAACTCTCCTTTGGCATCAAAACCTTGTGGCAAGTCACCTACCAAATCAGCCTCAAAGACAAGATTTGAAATTTCAAATCCAAACCTCACCATGGCAATGCAACCTAGTGAAACACCTTCCAGCACCCCATCAAGGAGCCTCAGCATTGACAATTGCTCTTCCATGAACAGGTCCCTCATGGTGTTTCCTTCGGCCTCTGCGGCGGCATTCCCGGGCTCCGGCCTTGCCACTGCCGGTGCTCCTAAGGCGGCGGATAACAAAAGTTGCCTAAAGATGTGCCAGAAAGATAACCAGTCCAAGAGCCGTGTCAGTAACAGCACAGGCAATAGAAGTGATGGGAAAGGAAGCATTGTTGTTGGTGATTCTAATAGCATCTCTACTGGAATAAGCTTCTCCCCAACAAGTGTTCTTCAAGTTTTTGGTAACAACCCTTCTTACGTGAATGACAAAACCAACAACACAGAATCTGCACCGGACCGGTGCCGGCGAACGGACGGCAAGAAGTGGCAATGCAAGAGTGTTGTTCTTCCTGGTCAGAAGTACTGTGCCACACACATGCACAGAGGTGCTAAAAAGCGTTTTGCAAGCCATGAAATAGCAGCAGCTGCTGCTACAACCACCACAACTACTTGTTCTGCCGTTACCATTGCGCGGTTGCCGAACTCTCCGGCCACAACCAACATGCAGAAAGAGGATTCCGCAATTCCAAGCACAAATCTTTCCATGTCAGTTCCAGCAAGTGCTCAATGCAATGGGAAAGGCTCTAGTAACAATGACACTGATACCACCATCAGTGACACCTTGCAAGAGTGTAGCTATACTTCTTTCTGA 1380 0.4703 MEAKPLRIVPSSHNTSGVGGGPRKKIDIGHAMRNGGAAGGVDVERRRVFMVKEEKEKEKEYSSNSVELHLGVDASHSAPPEINHVITEAQRRELHHQVFIFNHLAYKLPPPHHRVQFPSNMSEYSFLGFDHGNVVDPEPHRCRRTDGKKWRCSKSVVPGQKYCERHMHRGRNRSRKPVETSQVNSPLASKPCGKSPTKSASKTRFEISNPNLTMAMQPSETPSSTPSRSLSIDNCSSMNRSLMVFPSASAAAFPGSGLATAGAPKAADNKSCLKMCQKDNQSKSRVSNSTGNRSDGKGSIVVGDSNSISTGISFSPTSVLQVFGNNPSYVNDKTNNTESAPDRCRRTDGKKWQCKSVVLPGQKYCATHMHRGAKKRFASHEIAAAAATTTTTTCSAVTIARLPNSPATTNMQKEDSAIPSTNLSMSVPASAQCNGKGSSNNDTDTTISDTLQECSYTSF 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g01669 459 PANTHER GROWTH-REGULATING FACTOR 5 318 438 IPR031137 GO:0005634|GO:0006351|GO:0032502
Viun10g01669 459 MobiDBLite consensus disorder prediction 163 233 - -
Viun10g01669 459 MobiDBLite consensus disorder prediction 177 233 - -
Viun10g01669 459 ProSiteProfiles WRC domain profile. 338 383 IPR014977 -
Viun10g01669 459 ProSiteProfiles WRC domain profile. 136 180 IPR014977 -
Viun10g01669 459 ProSiteProfiles QLQ domain profile. 85 120 IPR014978 GO:0005524|GO:0005634|GO:0006355
Viun10g01669 459 Pfam WRC 341 378 IPR014977 -
Viun10g01669 459 Pfam WRC 137 179 IPR014977 -
Viun10g01669 459 MobiDBLite consensus disorder prediction 1 25 - -
Viun10g01669 459 MobiDBLite consensus disorder prediction 278 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g01669 Viun-Chr10 31631110 31634913 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g01669 323 372 GRF Transcription Factor Family AT2G22840 46.000 5.19e-09 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g01669 - - pvu:PHAVU_010G048400g 676.011