Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g01663 ATGGATTATGGAGGAAAGATTGGTGGAAGTGAAAGAGGTGGGCCTTGTGGTGCCTGCAAGTTTCTGAGGAGAAAGTGTGTGAAGGGTTGCATATTTGCACCATACTTTGACTCAGACCAAGGAACTGCACATTTTGCTGCAGTGCACAAGGTGTTTGGTGCAAGCAATGCCTCTAAGTTACTCATGAGAATCCCAGCACACAAACGTCTTGATGCTGTTGTTACTCTTTGCTATGAGGCTTTGGCTAGGGCTAGAGACCCTGTTTATGGTTGTGTTGGTCACCTCTTTGCTCTTCAACAACAGGTGATGAACTTGCAGGCTGAGTTAACCTATGTTCAAGCCCGTTTGGCAACAATGCAGCGCATGCCAATGGCAGTAGCTCCTCTTCCACAGCCTCAAAGTTCATCACCACAAACTCTTCCTTGCTCAGATCATTTGGCATCAAATGCTGACATGCAAAGTGTGCCTATTATGCAGTATGATCCTTTTCTTCCACATTCAGCATCGTTAGAGTTAAGCAGCATCCTTTTCAATCAATCAGATCAACAACTGGAGGATAGGGAACTCCAAACTTTGGCTCGAGAATTTGTCACCAAATACTTGCCCGGAGTAAGATTCCAGCAATCTAACTCTCCCTAA 639 0.4523 MDYGGKIGGSERGGPCGACKFLRRKCVKGCIFAPYFDSDQGTAHFAAVHKVFGASNASKLLMRIPAHKRLDAVVTLCYEALARARDPVYGCVGHLFALQQQVMNLQAELTYVQARLATMQRMPMAVAPLPQPQSSSPQTLPCSDHLASNADMQSVPIMQYDPFLPHSASLELSSILFNQSDQQLEDRELQTLAREFVTKYLPGVRFQQSNSP 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g01663 212 PANTHER LOB DOMAIN CONTAINING PROTEIN 12 140 - -
Viun10g01663 212 Pfam Lateral organ boundaries (LOB) domain 15 113 IPR004883 -
Viun10g01663 212 ProSiteProfiles LOB domain profile. 14 116 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g01663 Viun-Chr10 31473439 31476984 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g01663 13 210 AS2 family AT4G00210 55.140 1.16e-70 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Viun10g01663 LOB 2.5e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g01663 - - gmx:100791377 369.777