Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g01614 ATGTCTTGGGATGATAGTATGGTTTCTATGATGAGGGCGTTCAGACTTGTAGCTCATGATTATTGGATTAAACCTTTGCATGAGATTCGGTTCAAGAGTATGCGCACACACTTTCTGAAGAAATGTGTAAGTGAAGAAGATACGTCGCAGAAGGAAACTGAAACTGATTGCTTAATAAGAAGAATAAGTGATAATTCTGAACCGGCTTCATCAATGGCTCTTAGGAGCAACAACAATAATTTTGAAGAAGACGATGATGTTGATGAATCAATAAATCCACCCTCCACCAAGAAGCCTCGTGTTGTATGGGAAGAAAAACTGCATGGTGCATTTATCAACGCTATCAAACAAATTGGAATTGAAAATGTTGTGCCAAAGAAAATTCTTGAAGCAATGAATGTCCCTGTGACACAAATAGAGCAACAACAACAACAACAACAGAACGACATGTCTCTTGTTTCAAGGAGACAACAACAATCGCAACAGAATGACATGTCGTGGAACACAGAACCAAGGATGTGTGCAGTTGAAAGAGTTCACTTGCAACCTCTTTCTGCAACTGCAATGACAAATTTTTATCCTGGTTTTACAGGTAACATGGAAGAGGAAGCTTTGGCACATGATCATCATCCTTTAGGAACCGTTGGTAACATTGCCATCACCGAGAATTGTTCAGAAGAACAATCAAGTCCAAATACACAACTGGGTGACAATTTTCATGCAGAGGAAGAAGCTTTGGCACATGATCATAATTTAGCAAGTAACCAGAATTTTCAAGTGGGAACTCTAGATGATGATCCAACTATGCATCATAATCAAATGTATCCAATGTACTTTCAGCCATCTTCCACGATGATTTCTGGAAATCATCAACCTTTTGTCTCACAGAATTGCAACTTTGGTATGAACATGGATCATGTTTCTCAACCAATACAACAAGGTGAAGCCATTGTTAATGAATATAGTACTGGAGATTCCATTTATCGTCCACAGTTTCAAAATGCAGATTTGCCAAGTGGTGCTTTTAGGAGCCAAAATCGCCATATTGATGATAAGTTCTGTCAGCAATGA 1071 0.3866 MSWDDSMVSMMRAFRLVAHDYWIKPLHEIRFKSMRTHFLKKCVSEEDTSQKETETDCLIRRISDNSEPASSMALRSNNNNFEEDDDVDESINPPSTKKPRVVWEEKLHGAFINAIKQIGIENVVPKKILEAMNVPVTQIEQQQQQQQNDMSLVSRRQQQSQQNDMSWNTEPRMCAVERVHLQPLSATAMTNFYPGFTGNMEEEALAHDHHPLGTVGNIAITENCSEEQSSPNTQLGDNFHAEEEALAHDHNLASNQNFQVGTLDDDPTMHHNQMYPMYFQPSSTMISGNHQPFVSQNCNFGMNMDHVSQPIQQGEAIVNEYSTGDSIYRPQFQNADLPSGAFRSQNRHIDDKFCQQ 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g01614 356 SUPERFAMILY Homeodomain-like 96 135 IPR009057 -
Viun10g01614 356 MobiDBLite consensus disorder prediction 140 166 - -
Viun10g01614 356 NCBIfam myb-like DNA-binding domain, SHAQKYF class 98 137 IPR006447 GO:0003677
Viun10g01614 356 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 90 135 IPR044841 GO:0003700|GO:0006355
Viun10g01614 356 MobiDBLite consensus disorder prediction 64 78 - -
Viun10g01614 356 MobiDBLite consensus disorder prediction 62 97 - -
Viun10g01614 356 Gene3D - 95 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g01614 Viun-Chr10 31159523 31160701 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g01614 1 135 Response Regulator Gene Family AT3G16857 33.333 1.95e-15 75.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Viun10g01614 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g01614 - - vun:114165536 711.064