Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g01607 ATGAATGAATCAATTATGGCAAACTGTTTTTGCAGTTTACTAGTTATGGCCTTGTATATGATGGGTGAGCTATCATCTGTGTTTGGTGCCATCAATCAGGAACGCGAGGCTTTGCTGAACAGCGGTTGGTGGAATGATTACCGTAATATCTCAGACCATTGTCGTTGGGTGAGTATCGATTGCAATGAAGCTGGAAGTGTTATTGCTATTGATAGTTGGTACATGAAGACTCCTTCATCACAAGAATTGCTTTGGATAGATAAGTTGAACTTCACTGCCTTCCCCAATTTAGTCACTCTGTATCTAACTGGAATGGGTCTTAGAGGAAGCATCCCCACAGCAATAGGCTCACTTACAAACCTTACTTATATTGACCTGTCCAAAAATATTCTCCAAGGTTCAATACCACCAGAATTTGGTAACTTGACACAATTGCAGACGCTATCTTTCTTTCATAATTCTCTATCGGGTTCAATCCCATCTACATTGGGTCAATTGATGAATTTGAAATTTATGTATCTTGATTCAAACAAACTTGAAGGTAGGATTCCCACGGAATTTGGGAATTTGACAAAATTAGTCAAATTATATCTCTCAGATAATTTACTCACAGGTTCAATTCCTCCAAATTTGGGTCAATTAGAAAGCTTGACATACTTCTTTTTTCAATCCAACCAAATTACTGGTCCAATACCAGTAGAATTTGGAAATTTAAAAAGCTTACAAAGGTTATATCTCTCAAATAATTCTCTCAATGGTTCAATCCCTCCTACTTTAGGTCGTTTGGATAATTTGGTACATCTCTTTCTTGATTCTAACCAAATAGAAGGCTACATACCTGAAGAATTAGGGAATTTGTTCCAATTAGAAGTTTTGAGACTTAATCATAATAAGATCTCGGGTTTAATACCTGCAAAACTTTTTCAAATGGACAAAATGTTCTCCTTATATCTCTCATCAAATCAGTTATGCGGTTCAATTCCATTTGAAACCATGAAATGTCCTTACGCTACAATAGTTGATTTGAGCCATAACTTGTTTAATGGAAGCATAACTTCCCAAATTGGTTGTGTCAGTGACCTTAGTCTCAGTCACAATTTTCTTGTTGGTGAGATTCCATTTCCTTTTAGAAGGAGTTCCGTGCTTACGCGATTGGATCTTAGTTATAATAATCTCTCGGGTAAATTACACAAGGAACTTGCTAGTCTATCATATATAAATCTTTCATACAATTCATTTGACTTCTCACAAGATCTTGATTCAAAATCAGGGGTACCAGATTACTGCTATTTCAAGGAAGACTCATTAATTAATGATCACCACATGCCCAATTTCTCATACTGCCACTTGCTCAACCAAACAAATCCTCAAACTAGGAAAAGTAAGCCCGTGATCATGTTAATTCTTCTTCCTATCATTTTCTTCATTCTTTTATTACTCCTTTCAATATTATATTTCTCAAGATGTAAGCCTAAGAAAAAGTGTGAAGGAATAGCAACAAAGAATGGAAACTTGTTTTCTATATGGAACTATGATGGTAAAATTGCATTTGAGGATATCATTGAAGCAACCGAAGACTTTGACCTCAAGTACTGTATTGGGACAGGAGCATATGGCAGTGTTTATAGAGCACAATTACCCAGTGGAAATATTGTTGCGCTAAAAAAGCTCCACCATGTGGAATCTCAAAATCCATCATTTGAAAGAAGTTTTCAGAATGAGGTGAAGATGTTAACAAAAATTCGTCATAAAAATATCGTAAAGCTTCATGGCTATTGCCTCCACAATCGATGCATGTTTCTAGTCTATCAATACATGGAAAGAGGTAGTTTATTTTATATTTTGAATAACGAAGTGGAAGCTAAGGAATTGAATTGGAATAAGAGGGTGAATGTGATTAAAGGGATGGCAGAGGCTTTATCCTACATGCATCATGATTGTATCCCACCAATTGTTCATCGAGACGTAACAAGTAGCAATGTTCTATTAAACTCACAATTAGAGGCTCATGTCTCGGACTTTGGAACAGCTAGACTCCTTGATCCTGATTCCTCAAATCAAACCTTGGCAGTTGGCACATGTGGCTACATTGCTCCAGAACTTGCTTATACAATGAGTGTGACAGAAAAGTGTGATGTTTATAGTTTTGGAGTGGTGATTTTGGAAACATTAATGGGAAAACATCCTGGAGAGCTAATTGCATCATTATTTAACCCAACTACTCAAAGTATGTTGTTGAAAGATCTCTTGGATTCACGTCTTCCTCTTCCTCTTCAAAAAGATGCTAAAGACATACATCTTGTGGTAAATGTAGCATTATCATGTTTGTGCTCCAAACCAGACTTAAGGCCATCAATGCAACAAGTGGTTAAGAAACTCTCTAGTTTGAAAATACCATTTTATTTGCCTCTCCATGAAGTTTTTATCCATCAATTGATGAGCCAAGAAATAGGTCTTGTTTCATCTGAGTTTCATGAATATACTGAGCCATAG 2493 0.3626 MNESIMANCFCSLLVMALYMMGELSSVFGAINQEREALLNSGWWNDYRNISDHCRWVSIDCNEAGSVIAIDSWYMKTPSSQELLWIDKLNFTAFPNLVTLYLTGMGLRGSIPTAIGSLTNLTYIDLSKNILQGSIPPEFGNLTQLQTLSFFHNSLSGSIPSTLGQLMNLKFMYLDSNKLEGRIPTEFGNLTKLVKLYLSDNLLTGSIPPNLGQLESLTYFFFQSNQITGPIPVEFGNLKSLQRLYLSNNSLNGSIPPTLGRLDNLVHLFLDSNQIEGYIPEELGNLFQLEVLRLNHNKISGLIPAKLFQMDKMFSLYLSSNQLCGSIPFETMKCPYATIVDLSHNLFNGSITSQIGCVSDLSLSHNFLVGEIPFPFRRSSVLTRLDLSYNNLSGKLHKELASLSYINLSYNSFDFSQDLDSKSGVPDYCYFKEDSLINDHHMPNFSYCHLLNQTNPQTRKSKPVIMLILLPIIFFILLLLLSILYFSRCKPKKKCEGIATKNGNLFSIWNYDGKIAFEDIIEATEDFDLKYCIGTGAYGSVYRAQLPSGNIVALKKLHHVESQNPSFERSFQNEVKMLTKIRHKNIVKLHGYCLHNRCMFLVYQYMERGSLFYILNNEVEAKELNWNKRVNVIKGMAEALSYMHHDCIPPIVHRDVTSSNVLLNSQLEAHVSDFGTARLLDPDSSNQTLAVGTCGYIAPELAYTMSVTEKCDVYSFGVVILETLMGKHPGELIASLFNPTTQSMLLKDLLDSRLPLPLQKDAKDIHLVVNVALSCLCSKPDLRPSMQQVVKKLSSLKIPFYLPLHEVFIHQLMSQEIGLVSSEFHEYTEP 830
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g01607 830 FunFam Leucine-rich repeat receptor protein kinase MSP1 490 605 - -
Viun10g01607 830 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 251 418 - -
Viun10g01607 830 ProSiteProfiles Protein kinase domain profile. 527 801 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun10g01607 830 SMART LRR_typ_2 286 310 IPR003591 -
Viun10g01607 830 SMART LRR_typ_2 238 262 IPR003591 -
Viun10g01607 830 SMART LRR_typ_2 142 166 IPR003591 -
Viun10g01607 830 SMART LRR_typ_2 190 214 IPR003591 -
Viun10g01607 830 SMART LRR_typ_2 118 141 IPR003591 -
Viun10g01607 830 Pfam Leucine rich repeat 264 323 IPR001611 GO:0005515
Viun10g01607 830 Pfam Leucine rich repeat 95 155 IPR001611 GO:0005515
Viun10g01607 830 Pfam Leucine rich repeat 192 251 IPR001611 GO:0005515
Viun10g01607 830 FunFam MDIS1-interacting receptor like kinase 2 606 798 - -
Viun10g01607 830 Gene3D Ribonuclease Inhibitor 173 423 IPR032675 -
Viun10g01607 830 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 160 250 - -
Viun10g01607 830 SUPERFAMILY Protein kinase-like (PK-like) 513 793 IPR011009 -
Viun10g01607 830 ProSitePatterns Protein kinases ATP-binding region signature. 533 555 IPR017441 GO:0005524
Viun10g01607 830 Gene3D Transferase(Phosphotransferase) domain 1 606 799 - -
Viun10g01607 830 ProSitePatterns Tyrosine protein kinases specific active-site signature. 651 663 IPR008266 GO:0004672|GO:0006468
Viun10g01607 830 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 89 159 - -
Viun10g01607 830 Gene3D Phosphorylase Kinase; domain 1 492 605 - -
Viun10g01607 830 Gene3D Ribonuclease Inhibitor 27 168 IPR032675 -
Viun10g01607 830 SUPERFAMILY L domain-like 360 415 - -
Viun10g01607 830 SUPERFAMILY L domain-like 44 351 - -
Viun10g01607 830 Pfam Protein kinase domain 532 791 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun10g01607 830 PANTHER LEUCINE RICH REPEAT KINASE 2 91 797 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g01607 Viun-Chr10 31068634 31073166 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g01607 94 699 Receptor kinase-like Gene Family AT4G08850 36.864 9.82e-132 416
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Viun10g01607 Pkinase 5.8e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g01607 - - vun:114166569 1352.42