Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g01601 ATGAATGATTCCAACAACCCGATTGGCGAAGATGCACATAAATGCACATCTACCCAGCAAGGAGTAATTGATGATATTGTTGCGGAAAGGGTCAATGTCTTCACTACATTGGATGATGGTAACGCGATATCTTTGGAAGACATTTCTTTATTTGAAGAAACTCATGTGAATAACCCATGCGAAGATATTATTAAAGGTATCCATGACAAAATTAACGAAGAAGTTCCTGAAGTTGGCATGACTTTTGATAATGTAGACCAACTGAAGCAATCCTACAGGACATACGCTATTAAATGTGAGTTCGGTGTCAGAATAAGAAGTTCATCAAAAGGAGAAGACAATGAGTTATGCTTCATAAGGTTAGTTTGTAGTCGTGAAGGTAAGTGTCATGTCGCAGTTCCTTCAGAAGTAAAAAGTCTCCCGTCACAGAGAAAAGAATGTCCTGCCAGAATTAGCGGTGTGAAGAAGGAAGGGCAGTGGTATATACGCCACGTTAACAATGTCCACAACCATGACCTTAGTCCAAAAAAGTCCAGGTTGATACGGGGAAACAAAAAAATAAGCATGCAAGTCAAGAGGACACTAGATATGAATGATGAAGCCGGAGTGCGCATTAACAAGAGTTTCCAATCATTAGTTTGTGAAGCAGGTGGGTTTGAAAATGTTCCATTTGTTGAGCGTGATGTAAGGAATTACATCGAAAAGCAACGCAGGAGATTGTGCAAGGATGGTGATGCGCAGGCTCTCATAACACACTTCTCAAACATGCAACAATTGAACAATGACTTCTACTATGACATTGACTTGGATTCCGATGATCGCATCTCAAACGTTTTTTGGCTTGATGCGCGTAGTCGTGCAGCATGCCAAGAATTTGGAGATGTTATATCTTTCGACACAACGTATTTGACCAACAAGTACGATATGCCATTTGCACCTTTTGTCGGTATTAATCACCATGGGCAATCAATATTATTAGGATGTGGACTGTTGTCATCAGAAGATACATCCACCTTTGTTTGGCTATTTCAGAGTTGGCGTCGATGCATGTCCAACAGGTCACCTGAGGGAATTGTCACGGATCAATCCAAAGCCTTGCAAAACGTAATTGAAATTGTTTTCCAACATACAAGGCATAGATGGTGCCTTTGGCACATAATGAAAAAAATTCCGGAGAAGCTGCAAGGGTACTCCCAATATAAAAGAATTAAGTGCGAATTGAAGAAATTGGTATACGAGAGTGTTAATGTTCTTGACTTTGAAAGTGGTTGGAGTGAATTCTTGATGAAATATGAATTACAAAACAATGAATGGCTAGGAACACTATATGAAGACAGATATAGATGGGTGCCGACGTACTTGAAAAGTAATTTTTGGGCAGGAATGTCAACTACACAGCGAAGTGAGGGCCTGAATGCTTTCTTTGATGGTTTTATCAATTCCACAACCACATTGCATCATTTTGTTGTGCAATATAATAATGCACTAAAACACAAAGCGGAAAAGGAATGTGAAGCTGATTTTGCCTCAATGAACACAATTATTCCTTGCGCCACTCATTCCTTGATAGAGCGCCAGTTTCATGAAAATTACACAAATGCAAAGTTTGAGGAGATCCAAAAGGAGTTTAGATCCAAAATGAATTGTGTAATAAAAAATGTAGATGTCGACGACTTTGTCTCCAATTACATTGTGTTGCAAGAGTGTTTATGGGATGGTGATCGTGCAAACAAGTACCATAAAGTTATTTACAATTCCCACACTCAAACAATCACTTGCACGTGCTTGTTGTTTGAGTTTCGCGGGATATTGTGCCGCCACTGTTTGGTAGTTTTAGCCCAAGAAGAAGTCAAAACTGTACACTCAAGATACATAATTCCAAGGTGGAGTAAACTGATTCGAAGGAGATACTCTTCAATGAGAGCCGCTTACAACAACAAAAGTGACGATCCGCAAATGGTAAGGTACCAAGCGCTGTGCAAAGAATTCTTTGAACTTGCGGATGTCGCATGCGAAACTGAGTCTGCCATTGAAATTTTGTTTAATCAATTGAAGTCCTTGCGCAACAGCAGTAGCCACTGTTCTGGGGTTATGCAGATCCAAATCAACTGCCCCACACCCGGTGGGCAAATTAACACAACAGTGCGGAGTCCCGTTGCTGTGAAGAGAAAGGGGCGGCCACGTGTTGCAAGGATGAAATCAGCCGTGGAGAAGGTTGCCAAGAAAAAAAAGTCTGCTTATCCAAATTTAAAAACAGACTACAACACCTATGCGCCTGTGGATGTTGATGTCTGTGATGATAACCAACATTGTGATAGTCAAGGAACAAACACTCCTAAATGGAATGCGAGTGTTCCCAATTCAGGTTTCATGTCCTTGTTAACCTCGGTTCAAAGCAATGAGTTCCACAGTCAAATGTCTCCATCATCGTCGCAATTATGGTGA 2445 0.4065 MNDSNNPIGEDAHKCTSTQQGVIDDIVAERVNVFTTLDDGNAISLEDISLFEETHVNNPCEDIIKGIHDKINEEVPEVGMTFDNVDQLKQSYRTYAIKCEFGVRIRSSSKGEDNELCFIRLVCSREGKCHVAVPSEVKSLPSQRKECPARISGVKKEGQWYIRHVNNVHNHDLSPKKSRLIRGNKKISMQVKRTLDMNDEAGVRINKSFQSLVCEAGGFENVPFVERDVRNYIEKQRRRLCKDGDAQALITHFSNMQQLNNDFYYDIDLDSDDRISNVFWLDARSRAACQEFGDVISFDTTYLTNKYDMPFAPFVGINHHGQSILLGCGLLSSEDTSTFVWLFQSWRRCMSNRSPEGIVTDQSKALQNVIEIVFQHTRHRWCLWHIMKKIPEKLQGYSQYKRIKCELKKLVYESVNVLDFESGWSEFLMKYELQNNEWLGTLYEDRYRWVPTYLKSNFWAGMSTTQRSEGLNAFFDGFINSTTTLHHFVVQYNNALKHKAEKECEADFASMNTIIPCATHSLIERQFHENYTNAKFEEIQKEFRSKMNCVIKNVDVDDFVSNYIVLQECLWDGDRANKYHKVIYNSHTQTITCTCLLFEFRGILCRHCLVVLAQEEVKTVHSRYIIPRWSKLIRRRYSSMRAAYNNKSDDPQMVRYQALCKEFFELADVACETESAIEILFNQLKSLRNSSSHCSGVMQIQINCPTPGGQINTTVRSPVAVKRKGRPRVARMKSAVEKVAKKKKSAYPNLKTDYNTYAPVDVDVCDDNQHCDSQGTNTPKWNASVPNSGFMSLLTSVQSNEFHSQMSPSSSQLW 814
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g01601 814 Pfam MULE transposase domain 295 389 IPR018289 -
Viun10g01601 814 Pfam FAR1 DNA-binding domain 92 174 IPR004330 -
Viun10g01601 814 ProSiteProfiles Zinc finger SWIM-type profile. 584 616 IPR007527 GO:0008270
Viun10g01601 814 PANTHER OS01G0519700 PROTEIN 72 747 - -
Viun10g01601 814 Pfam SWIM zinc finger 590 612 IPR007527 GO:0008270
Viun10g01601 814 SMART 26again6 591 618 IPR006564 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g01601 Viun-Chr10 30943098 30945927 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Viun10g01601 MULE 4.4e-32 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g01601 - - vun:114180824 870.152