Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g01567 ATGGCACAACTCAACCTCACCTTTTTGCTTGTGATCTTCCTCTCTTTCTTCTTCTCATTTCTTGCAGCCCCAGTTGAGCCATCATCATTGACAAGTCACAGAAACCCTAACCCTAAAACAATGACCTACATAGAGTCCTCTTGCAAAGGCACCCTCTACCCTAATCTCTGCGTCCGTTGTCTTTCCCAATATGCAAAATCCCCCTTGAATGGCCCACAACACTTGGCACAGTATGCCCTATCAGTGAGCCTCTCTAGGGCACTGCACACAAAAGGGTACCTTCTGGAAGTGGCAAAGGAGCTCCAAGCCATCAAGAGCAACAAAAGAGAGTACCTAACAGTGCAAGATTGTGTGAACCAGATCAGTGATAGTGTGGAACAAATTAGCCAAGCCATGAAAGAACTTCGTAGCTTCAACAAACAGGACTCAAGCATGAATGATAACATGTTGTGGCACATAAGCAATGTTGAGACATGGATGAGCACAGCTTTGACAGATGCTAGTAGTTGTGTGTACTCTTTTCCTGGGAATAGAATGAGTAAGAGAGTGGCTGCTATTAAGGTTAAGGCCAAGAATGTTGCAGAAGTTACAAGTAATGCTCTTTTCTTGTTCCATAGATATGCATCTACATACCAGAAAGCAGCAACTAAAATCAGCAAGAAGCCCTAG 669 0.4395 MAQLNLTFLLVIFLSFFFSFLAAPVEPSSLTSHRNPNPKTMTYIESSCKGTLYPNLCVRCLSQYAKSPLNGPQHLAQYALSVSLSRALHTKGYLLEVAKELQAIKSNKREYLTVQDCVNQISDSVEQISQAMKELRSFNKQDSSMNDNMLWHISNVETWMSTALTDASSCVYSFPGNRMSKRVAAIKVKAKNVAEVTSNALFLFHRYASTYQKAATKISKKP 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g01567 222 Pfam Plant invertase/pectin methylesterase inhibitor 43 201 IPR006501 GO:0004857
Viun10g01567 222 CDD PMEI-like_3 46 209 - -
Viun10g01567 222 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 43 207 IPR035513 -
Viun10g01567 222 FunFam Pectinesterase inhibitor 3 39 208 - -
Viun10g01567 222 PANTHER PECTINESTERASE INHIBITOR-LIKE 9 202 - -
Viun10g01567 222 Gene3D Invertase/pectin methylesterase inhibitor family protein 40 207 IPR035513 -
Viun10g01567 222 SMART PMEI_2 39 203 IPR006501 GO:0004857
Viun10g01567 222 NCBIfam pectinesterase inhibitor domain 12 206 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g01567 Viun-Chr10 30810608 30811451 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g01567 25 210 Carbohydrate Esterase AT1G53830 23.469 2.55e-10 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g01567 - - gmx:100791798 321.627