Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g01566 ATGGCACAACTCAACCTCACATTTTTTCTTGTGATCTTCCTCTCTCTCTTCTTCTCATTTCTTGCCACCCCAGTTGAGCCATCATCATTGACAAGTCACAGAAACCCTAACCCTAAAACAATGACCTACATAGAGTCCTCTTGCAAAGGCACCCTCTACCCTAATCTCTGCATGCGTTGTCTTTCCCAATATGCAAAATCCCCCTTAAATGGCCCACAACACTTGGCTCAACATGCCTTATCAGTGAGCCTCTCTAGGGCACTGCACACAAAAGGGTATCTTCTGAAAGTGGCAAAGGAGCTTCAAGCCATCAAGAGCAACAAAAAAGAGTACCTAACAGTGCAAGATTGTGTGAACCAAATCAGTGATAGTGTGGAACAAATTAGCCAGGCCATGAAAGAACTTCGTAGCTTCAACAAACATGATTCAAACATGAATGATAAGATGTTGTGGCACATAAGCAATGTTGAGACATGGGTGAGCACAGCTTTGACAGATGCTAGTAGTTGTGTGTACTCTTTTCCTGGGAATAGAATGAGTAAGAGAGTTGCTGCTATTAAGGTTAAGGCCAAGAATGTTGCAGAAGTTACAAGTAATGCTCTTTTCTTGTTCCATAGATATGCATCTACCTACCAGAAAGCCACAATGAACACCAATAATTCGTAA 666 0.4204 MAQLNLTFFLVIFLSLFFSFLATPVEPSSLTSHRNPNPKTMTYIESSCKGTLYPNLCMRCLSQYAKSPLNGPQHLAQHALSVSLSRALHTKGYLLKVAKELQAIKSNKKEYLTVQDCVNQISDSVEQISQAMKELRSFNKHDSNMNDKMLWHISNVETWVSTALTDASSCVYSFPGNRMSKRVAAIKVKAKNVAEVTSNALFLFHRYASTYQKATMNTNNS 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g01566 221 FunFam Pectinesterase inhibitor 3 39 208 - -
Viun10g01566 221 CDD PMEI-like_3 46 209 - -
Viun10g01566 221 Pfam Plant invertase/pectin methylesterase inhibitor 43 201 IPR006501 GO:0004857
Viun10g01566 221 PANTHER PECTINESTERASE INHIBITOR-LIKE 10 202 - -
Viun10g01566 221 NCBIfam pectinesterase inhibitor domain 11 206 IPR006501 GO:0004857
Viun10g01566 221 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 43 207 IPR035513 -
Viun10g01566 221 Gene3D Invertase/pectin methylesterase inhibitor family protein 40 207 IPR035513 -
Viun10g01566 221 SMART PMEI_2 39 203 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g01566 Viun-Chr10 30804599 30805444 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g01566 34 220 Carbohydrate Esterase AT3G14310 21.762 5.01e-10 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g01566 - - gmx:100791798 323.168