Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g01548 ATGCAGTTCAGGCTAGGCAAGCGCGTTTTCCGTGTCGCCACATGGCTCTTCCGTCGGGTTCGGTTCAGAACCCGACCCAACAGATATTATCGTCTCGGATCCACCTCTCCTACGCGCAGTCACAATCATAATCCCATGGCGAAGCTTCTTACATGGGGGACAAAGTTGAAGAGAGGAGCGCAGTCTCTCTGTAAGAAATCCGGGTCGGGTCTCGATTGCGAGAGGGCCCCGGCGGTGCCGAAAGGGCACTTGGCGGTTTACGTGGGGGAGGAAAACGGCGAGTGTCGCCGGGTTTTGGTGCCGGTGATTTACTTCAACCACCCTCTGTTCAGCGGGTTGTTAAGGGAAGCTGAGAAGGAATTCGGGTTCGAGCAACCCGGTGGGATCACGATTCCGTGCCGACTCACCGAGTTTGAACGGGTCAAAACCCGGATCGCGTCCGGGTCGGGTTTACGCGGGAGAACCCGGAGGTTGGGGTGGCGGCTACATTCTTCTTGA 498 0.5743 MQFRLGKRVFRVATWLFRRVRFRTRPNRYYRLGSTSPTRSHNHNPMAKLLTWGTKLKRGAQSLCKKSGSGLDCERAPAVPKGHLAVYVGEENGECRRVLVPVIYFNHPLFSGLLREAEKEFGFEQPGGITIPCRLTEFERVKTRIASGSGLRGRTRRLGWRLHSS 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g01548 165 Pfam Auxin responsive protein 66 142 IPR003676 GO:0009733
Viun10g01548 165 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 64 140 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g01548 Viun-Chr10 30541320 30542403 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g01548 79 139 Calmodulin-binding Proteins AT5G20810 54.098 2.94e-16 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g01548 K14488 - gmx:100808164 240.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun10g01548 10 30541320 30542403 Viun10g01548 10 30541320 30542403 ECH