Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g01544 ATGTTTCACCGGTTGTTCAGTGAGTGTGAAGCCATGATTGGTGGTATCCTCTTTTTTTCAGATTATATTCCTTTCATGGGTTGGATTGATAAACTGAGGGGACTGCATGCACGTCTTCAACGGAGTTTCAAGGAGATGGATAAGTTCTATCAACAAGTCATTGACGAACACATGGCAGATTCTCATAAAAATACTCCACACGAAGATGACATCGTTGATGTCTTACTTCAACTCAAGAAACACTATTCGTTTTCCATCGATATCACCAATGATAACATCAAAGCTGTGCTCATGAACATTCTGATTGCAGCAACAGATACAACTGCAGCCACAGTTGTGTGGGCTATGACTTTACTGTTAAAGCATCCAAGAATCATGAAGAAAGTTCAAGAAGAAGTAAGAAGTTTAAGTGGTGAGAAAGCCTTTTTGGATGAAGATGATGTTCAAAAGTTTCCCTATTTAAAAGCAGTGATAAAAGAGACGCTAAGATTGCACCCACCAGCACCATTACTTATTCCTAGAGAAACAAGGAAAAAAGTTATGATAGTTGATTATGAAATTCCAGCGAAGACAATAATATATGTGAATGCTTGGGCTATTCATAGAGATCCTGAGGCTTGGGAAGATGCAGAAGAGTTTATACCAGAGAGGTTTTTAAACAGCAGTGTAGATCTTCGAGGACAAGATTTTTGTTTGATACCATTCGGTGCTGGTCGTAGAATGTGCCCAGGTTTGCATATGGGTTTGGCTTCATTGGATGTTATTCTTAGTAACCTTCTTTATTCTTTTGACTGGGAATTGCCGGAAGGAATGAAGAGCGAAGACATTGATACAGAAACGTTACCAGGACTTACACAGCATAAGAAGAATCCTCTGTGTGTTATGGCCAACTGCCAAATGTGA 903 0.3931 MFHRLFSECEAMIGGILFFSDYIPFMGWIDKLRGLHARLQRSFKEMDKFYQQVIDEHMADSHKNTPHEDDIVDVLLQLKKHYSFSIDITNDNIKAVLMNILIAATDTTAATVVWAMTLLLKHPRIMKKVQEEVRSLSGEKAFLDEDDVQKFPYLKAVIKETLRLHPPAPLLIPRETRKKVMIVDYEIPAKTIIYVNAWAIHRDPEAWEDAEEFIPERFLNSSVDLRGQDFCLIPFGAGRRMCPGLHMGLASLDVILSNLLYSFDWELPEGMKSEDIDTETLPGLTQHKKNPLCVMANCQM 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g01544 300 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 235 244 IPR017972 GO:0005506|GO:0016705
Viun10g01544 300 Pfam Cytochrome P450 23 290 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g01544 300 SUPERFAMILY Cytochrome P450 11 295 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g01544 300 Gene3D Cytochrome P450 1 299 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g01544 300 FunFam Predicted protein 101 294 - -
Viun10g01544 300 PRINTS E-class P450 group I signature 112 138 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g01544 300 PRINTS E-class P450 group I signature 232 242 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g01544 300 PRINTS E-class P450 group I signature 155 173 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g01544 300 PRINTS E-class P450 group I signature 196 220 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g01544 300 PRINTS E-class P450 group I signature 92 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g01544 300 PRINTS E-class P450 group I signature 242 265 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g01544 300 PRINTS P450 superfamily signature 156 167 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g01544 300 PRINTS P450 superfamily signature 233 242 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g01544 300 PRINTS P450 superfamily signature 103 120 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g01544 300 Coils Coil 126 146 - -
Viun10g01544 300 PANTHER CYTOCHROME P450 71B11-RELATED 2 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g01544 Viun-Chr10 30456519 30458325 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g01544 2 294 Cytochrome P450 AT4G31500 50.000 1.90e-104 312
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g01544 - - gmx:100796528 461.07