Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g01540 ATGAAAGACCATGACCTTGAGTGTTGTGATCGACCCAAATTACTTGGCCAACAGAAACTGTCCTATGATGGCTTAGACATGGCATTTTCCCCATACAGTAGCTATTGGAGAGAAATCAGAAAAATCTGTGTTATTCATGTCTTTAGCTCCAAACGTGTCTCATGTTTTTCCTCAATAAGAAATTTTGAGGTGAAACAAATGATAAAAACAATATCTCGCCATGCCTCAACTTCAGAAGATTATATTCCTTTCATGGGTTGGGTTGATACACTGAGAGGACTGCGTGCACGTCTTCAACGGAATTTCAAGGAGATGGATAAGTTCTACCAACAAGTCATTGACGAACACAAGGCTAATTCTCGTAAAAATACTCCTCACGAAGATGACATCGTTGATGTCTTACTTCAACTCAAGAAACACTATTCGTTTTCCATCGATATTACTAATGATAACATCAAAGCTGTGCTCATGAACATTCTGATTGCAGCAACAGATACAACTGCAGTCACAGTAGTGTGGGCAATGACTTTACTGTTAAAGCATCCAAGAACCATGAAGAAGGTTCAAGAAGAAGTAAGAAGTTTAAGTGGTGAGAAAGCCGTTTTAGATGAAGATGATGTTCAGAAGTTTTCCTATTTAAAAGCAGTGATAAAAGAAACATTGAGACTGTACCCAGCAGCACCATTACTTATTCCTAGAGAAACAAGGAAAAAAGTCATGATAGATGGTTATGAAATTCCAGCTAAGACAATAATATATGTGAATGCTTGGGCTATTCATAGAGATCCTGAGTCTTGGGAAGATGCAGAAGAGTTTATACCAGAGAGGTTTTGGTAG 837 0.3811 MKDHDLECCDRPKLLGQQKLSYDGLDMAFSPYSSYWREIRKICVIHVFSSKRVSCFSSIRNFEVKQMIKTISRHASTSEDYIPFMGWVDTLRGLRARLQRNFKEMDKFYQQVIDEHKANSRKNTPHEDDIVDVLLQLKKHYSFSIDITNDNIKAVLMNILIAATDTTAVTVVWAMTLLLKHPRTMKKVQEEVRSLSGEKAVLDEDDVQKFSYLKAVIKETLRLYPAAPLLIPRETRKKVMIDGYEIPAKTIIYVNAWAIHRDPESWEDAEEFIPERFW 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g01540 278 SUPERFAMILY Cytochrome P450 2 277 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g01540 278 PRINTS E-class P450 group I signature 255 278 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g01540 278 PRINTS E-class P450 group I signature 171 197 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g01540 278 PRINTS E-class P450 group I signature 151 168 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g01540 278 PRINTS E-class P450 group I signature 214 232 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g01540 278 Pfam Cytochrome P450 63 277 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g01540 278 PANTHER CYTOCHROME P450 71B11-RELATED 1 72 - -
Viun10g01540 278 Gene3D Cytochrome P450 77 278 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g01540 278 PRINTS P450 superfamily signature 162 179 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g01540 278 PRINTS P450 superfamily signature 215 226 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g01540 278 Coils Coil 185 205 - -
Viun10g01540 278 Gene3D Cytochrome P450 1 76 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g01540 Viun-Chr10 30425163 30426852 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g01540 1 277 Cytochrome P450 AT3G26330 39.458 3.35e-84 259
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g01540 - - vun:114166678 551.592