Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g01533 ATGCATGTGACAATGTTCTCATCACTTCTTCTTCTTCTTTGCCTTACTTTTCCAGTGTTTTTGCTCTTCTTCTTCTTCAAAACTTTGAAAAATCCACCACTTCCACCTGGTCCTAAAGGTCTTCCCATTGTGGGAAATATTCTTCAACTAGATAGTTCTTCTCTTCATATGCAGCTAAGGGAACTTTCAAAGAAATATGGTCCTTTATTTACCCTTAAATTAGGTTTAAAGCAAGCAATAGTTGTTTCCTCACCAAAACTAGCCACAGTGGTAATGAAAGACCATGACCGAGAATGTTGTGGACGACCAAGATTACTTCGCCAACAGAAACTCTCTTATAATGGGTTAGACTTAGCATTTTGCCCATATACTGAGTATTGGAGAGAAATCAGAAAACTTTGTGTTGTCCATGTCCTTAGCTCCAAACGAGTCTCATGTTTTTCCTCGTTAAGACATTTTGAGGTGAAGCAGATGATAAAGAAAATATCCATGCATGCCTCAAATTCAGAAGTTACCAATCTGAGTGAAGTGATAGTGTCTCTTACCAGCACTATTATCTGCAGAATTGCTTTGGGGAGAAGGTATGAAGAGGAAGGAACGGAAAGGAACAAGTTCTATAGGTTGCTGAGTGAGTGTGAAACCATGATGAGTTCCTTCTTTGTTTCAGATTATATTCCTTTCATGGGTTGGGTTGATACACTCAGGGGAATTCATGCACGTCTTGAACGGACTTTCAAAGAAATGGATAACTTCTACCAAGAAGTCATTGATGAACACATTGCAGATTCTCATAAAAAGACTTCAGAGGAAGAGGACATCGTTGATGTCTTGCTTCAACAGAAGCAGCACCATTCGTTTTCCATAGATCTCACTAATGATAACATCAAAGCTGTGATCATGAACATGATTATAGGCTCAACAAGTACCACTACAGCCACAGCAGTTGGGGCAATGACTGAGCTAGTAAAAAATTCCAGAATCATGAAGAAAGTTCAAGAAGAAGTAAGAAGTTTAAGTGGTGAGAAAGCCTTTTTAGATGAAGATGATGTTCAAAAGTTTCCCTATTTAAAAGCAGTGATAAAAGAGACTCTAAGATTGCACCCACCAGGACCATTACTTATTCCTAGAGAAACAAGGAAAAAAGTTATTATAGATGATTATGAAATTCCAGCGAAGACAATAATATATGTGAATGGTTGGGCTATTCATAGAGATCCTGAGGCTTGGGAAGATGCAGAAGAGTTTATACCAGAGAGGTTTTTAAACAGCACAGTAGATCTTCGAGGACAAGATTTTTGTTTGATACCATTCGGTGCTGGTCGTAGAATGTGCCCAGGTTTGCATATGGGTTTGGCTTCATTGGATGTTATTCTTAGTAACCTTCTTTATTCTTTTGACTGGGAATTGGTAGAAGGAACCGAAACAAACGACACAGGTTCTACAGTGTTGCCAGGACTTACACATGACAAGAAGAATCCTTTTCGTGTTTTAGCGAAGTGTCGTAATTAA 1509 0.3857 MHVTMFSSLLLLLCLTFPVFLLFFFFKTLKNPPLPPGPKGLPIVGNILQLDSSSLHMQLRELSKKYGPLFTLKLGLKQAIVVSSPKLATVVMKDHDRECCGRPRLLRQQKLSYNGLDLAFCPYTEYWREIRKLCVVHVLSSKRVSCFSSLRHFEVKQMIKKISMHASNSEVTNLSEVIVSLTSTIICRIALGRRYEEEGTERNKFYRLLSECETMMSSFFVSDYIPFMGWVDTLRGIHARLERTFKEMDNFYQEVIDEHIADSHKKTSEEEDIVDVLLQQKQHHSFSIDLTNDNIKAVIMNMIIGSTSTTTATAVGAMTELVKNSRIMKKVQEEVRSLSGEKAFLDEDDVQKFPYLKAVIKETLRLHPPGPLLIPRETRKKVIIDDYEIPAKTIIYVNGWAIHRDPEAWEDAEEFIPERFLNSTVDLRGQDFCLIPFGAGRRMCPGLHMGLASLDVILSNLLYSFDWELVEGTETNDTGSTVLPGLTHDKKNPFRVLAKCRN 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g01533 502 CDD CYP71-like 65 493 - -
Viun10g01533 502 Coils Coil 328 348 - -
Viun10g01533 502 Gene3D Cytochrome P450 28 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g01533 502 PRINTS E-class P450 group I signature 314 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g01533 502 PRINTS E-class P450 group I signature 181 199 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g01533 502 PRINTS E-class P450 group I signature 357 375 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g01533 502 PRINTS E-class P450 group I signature 294 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g01533 502 PRINTS E-class P450 group I signature 444 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g01533 502 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g01533 502 PRINTS E-class P450 group I signature 434 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g01533 502 PRINTS E-class P450 group I signature 398 422 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g01533 502 PANTHER CYTOCHROME P450 71B11-RELATED 19 499 - -
Viun10g01533 502 SUPERFAMILY Cytochrome P450 35 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g01533 502 PRINTS P450 superfamily signature 435 444 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g01533 502 PRINTS P450 superfamily signature 305 322 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g01533 502 PRINTS P450 superfamily signature 358 369 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g01533 502 Pfam Cytochrome P450 35 481 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g01533 502 FunFam Cytochrome P450 83B1 23 497 - -
Viun10g01533 502 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 437 446 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g01533 Viun-Chr10 30287865 30289721 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g01533 10 491 Cytochrome P450 AT4G31500 44.969 2.91e-153 444
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g01533 - - gmx:100796528 687.952