Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g01532 ATGGAACATGCCCCTTCTCTTTTGTTTTCAAAAATTCGAAGCCTTTGGTTCTTTGTATGCTTAACCATTATCCTAAAATCCCTAATACCTAGCTTTGTTCAGAAATGGTCCAAGAAACAAAAACCAAAACTTCCCCCAGGTCCCAAACCGTGGCCTGTGGTGGGCAACCTTCCTGAGATGCTTGCATACAAACCTGTTCATCGATGGATACACAATCTCATGAAACAAATGAACACTGAGATTGCATGCATCCGCCTCGGAAATACCTATGTTATCCCTGTCACATGTCCCACCATTGCCAGACAGTTTTTGAGAGAACAGGATGCAACTTTTGCATCAAGATCACTAACCACTTGTACTGATCTCGTTAGTAGCGGGTATGTAACCACAGCTTTAGTGCCATTTGGGGACCAATGGAAGAAAATGAAGAAAATCTTAACCACTGCTTTGCTTTCCTCACAAAAGCACCTATGGCTTCATGACAGAAGGACTGAAGAAGCCGACAACCTTATGGTTTATGTCTACAACAAAAGCAAAATTGTGAGCAATGGTGTTCCTGGCCTTGTCAACATCAGAAGTGTTGCAAGGCATTATTGTGGCAATATTACGAGGAAAATTGTTTTCAATACAAGGTATTTTGGGAAAGGTAGGAAGGATGGAGGGCCTAGTTTTGAGGAGAAAGAACATGTTGATTCCATCTTCCTTTTACTTAGCTATGTCTATGCCTTTTCTATTTCTGATTATATTCCATGCTTGAGGAAACTTAACTTGGATGGACACCAGAAGAAGGTGAAAGAAGCTTTGAAAGTGATAAAGAAATATCATGATCCCATTGTTCAAGAAAGAGTTAAACAATGGAATGATACACCAAAGATTGATGAACAAGACTGGCTGGACATTTTGATCTCCTTGAAAGATGCCGACAATAATCCATTATTGACATTGGAAGAAATTAATGCACAAATTGTGGAAATAATGATTGCAACAGTGGACAATCCATCAAATGCTTTCGAATGGGCACTAGCTGAAATGATAAACCAACCAAATTTGCTCCAACGAGCCATTGAAGAATTGGACAGTGTGGTGGGAAAACAGAGGTTGGTTCAAGAATCAGATATACCAAAGCTTAACTTTGTAAAGGCCTGTGCAAGAGAAGCTTTTCGCCTTCATCCCTTTGCACCTTTTACTCCTCCCCATGTTTCAATGAGTGATACAACTGTGGGAAACTACTTCATTCCAAAGGGTAGCCATGTAATACTAAGTAGAAGAGAACTTGGAAGAAACCCTAAAGTATGGAATGAACCCCTAAAGTTTAAACCAGAACGTCACCTTAAGAGTGATAATGGCTCTAATGTAGCTTTGACAGAGCCAAATTTGAGATTCATATCGTTTAGCACAGGAAGGCGTGGTTGTCCTGGAGTTACGCTTGGGACCTCAATGACCGTGATGTTATTTGCAAGGTTGCTTCATGGCTTCACTTGGTCTGCGCCATCCAATGTTTCAAAAATAAACCTAGCTGAATCCAATGATGATTTAAATCTTGCAGAGCCACTTATGGCAGTTGCTAAGCCTAGATTACCACCAGAATTATATCACCTTTAA 1602 0.4032 MEHAPSLLFSKIRSLWFFVCLTIILKSLIPSFVQKWSKKQKPKLPPGPKPWPVVGNLPEMLAYKPVHRWIHNLMKQMNTEIACIRLGNTYVIPVTCPTIARQFLREQDATFASRSLTTCTDLVSSGYVTTALVPFGDQWKKMKKILTTALLSSQKHLWLHDRRTEEADNLMVYVYNKSKIVSNGVPGLVNIRSVARHYCGNITRKIVFNTRYFGKGRKDGGPSFEEKEHVDSIFLLLSYVYAFSISDYIPCLRKLNLDGHQKKVKEALKVIKKYHDPIVQERVKQWNDTPKIDEQDWLDILISLKDADNNPLLTLEEINAQIVEIMIATVDNPSNAFEWALAEMINQPNLLQRAIEELDSVVGKQRLVQESDIPKLNFVKACAREAFRLHPFAPFTPPHVSMSDTTVGNYFIPKGSHVILSRRELGRNPKVWNEPLKFKPERHLKSDNGSNVALTEPNLRFISFSTGRRGCPGVTLGTSMTVMLFARLLHGFTWSAPSNVSKINLAESNDDLNLAEPLMAVAKPRLPPELYHL 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g01532 533 CDD CYP79 79 526 - -
Viun10g01532 533 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 464 473 IPR017972 GO:0005506|GO:0016705
Viun10g01532 533 Pfam Cytochrome P450 45 508 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g01532 533 PANTHER CYTOCHROME P450 703A2-RELATED-RELATED 16 532 - -
Viun10g01532 533 SUPERFAMILY Cytochrome P450 45 525 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g01532 533 Gene3D Cytochrome P450 36 527 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g01532 533 PRINTS E-class P450 group I signature 421 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g01532 533 PRINTS E-class P450 group I signature 461 471 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g01532 533 PRINTS E-class P450 group I signature 99 120 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g01532 533 PRINTS E-class P450 group I signature 198 216 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g01532 533 PRINTS E-class P450 group I signature 380 398 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g01532 533 PRINTS E-class P450 group I signature 337 363 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g01532 533 PRINTS E-class P450 group I signature 471 494 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g01532 533 FunFam Cytochrome P450 9 37 529 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g01532 Viun-Chr10 30281371 30283191 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g01532 12 531 Cytochrome P450 AT4G39950 53.920 0.0 590
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g01532 - K14984 vra:106778952 908.672