Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g01527 ATGGAACATTCCCCTTCTCTTTTTCTGTCAACTCTTCAAAGCCTTTGGTTGTTTGTGATCATTGTGCTAAAACCCCTGATACCTAGCTTGATTCAGAAATGGTCCAAGAAACAAAAACCAAAACTTCCACCAGGTCCCAAACCATGGCCTATGGTGGGCAACCTTCCTGAGATGTTTGCCAACAAACCTGTTCATCGATGGATACACAATCTCATGAAACAAATGAACACTGAGATTGCATGTATCCGCCTCGGAAATACCTATGTTATCCCAGTCACATGTCCCACCATTGCCAAACAGTTTTTGAGTGAACAAGATGCAATATTTGCATCAAGATATGTAAACACTTGCACTGATCTCGTTACTAGCGGACATGTAACCACAGTTTTAGTGCCATATGGGGACCAATGGAAGAAAATGAAGAAAATCTTAACCACTGCTTTGCTTTCTTCACACAAGCACCTATGGCTCCAGAACAGAAGGACTGAGGAAGCTGACAACCTTATGTTTTACGTTTACAACAAAAGCAAAAGTGTGAACAATGGTGTTGCTGGCCTTGTGAACATCAGAAGTGTTGCAAAGCATTATTGTGGCAATGTTATAAGGAAAATTCTTTTCAATAAGAGGTATTTTGGGAAGGGTAGGAAGGATGGAGGACCTGGTTTTGAGGAGGAAGAACATGTTGATTCCATCTTCATTTTACTTAAGTATGTTTATGCTTTTTCTATTTCTGATTTTATCCCACCCTTGAGGAGACTTGACTTGGATGGACACCAGAAGAAGGTGAGGGAAGCTTTGAATGTCATGAAGAAATATCATGATCCCATCGTTCAAGAAAGAGTTAAACAATGGAATGATACACCAAAGATGGATGAACAAGACTGGCTTGACATTTTGATCTCCTTGAAAGATGCCGACAATAAACCATTATTGACAATGGAAGAAATTAGTGCACAAATTGTGGAAGTATTGATGGCAGCAGTGGACAATCCATCAAATGCTTTTGAATGGGCACTAGCTGAAATGATAAACCAACCAAATTTGCTCCAACGAGCAATTGAAGAATTGGACAGTGTGGTGGGAAAAGAGAGGTTGGTTCAAGAATCAGATATACCAAAGCTTAACTTTGTAAAGGCCTGTGCAAGAGAAGCTTTTCGCCTTCATCCCTTGGCAGATTTTAATGTTCCCCATGTCTCAATGAGTGACACAACTGTAGGAAATTACTTCATTCCGAATGGTAGCCATGTATTGCTAAGTAGAAAAGGACTTGGAAGAAACCCAAAAGTGTGGAATGAACCCCTCAAGTTTAAACCAGAACGTCATCTTACGAGTGATAATGGGTCTAACGTAGTTTTGACAGAGCCAAATTTGAGGTTCATATCGTTTAGCACAGGAAGGCGTGGTTGTCCTGGAGTAATGCTTGGGACCACAATGACCGTGATGTTATTTGCTAGGTTGCTCCATGGCTTCACTTGGACTGCACCACCCAATGTTTCAAAAATAAACCTAGTTGAGTCCAATAATGAGATTAATCTCGCAGAGCCACTTATGGCAGTTGCTAAGCCCAGATTAGCACCACAATTATATCACCTTTAA 1596 0.4066 MEHSPSLFLSTLQSLWLFVIIVLKPLIPSLIQKWSKKQKPKLPPGPKPWPMVGNLPEMFANKPVHRWIHNLMKQMNTEIACIRLGNTYVIPVTCPTIAKQFLSEQDAIFASRYVNTCTDLVTSGHVTTVLVPYGDQWKKMKKILTTALLSSHKHLWLQNRRTEEADNLMFYVYNKSKSVNNGVAGLVNIRSVAKHYCGNVIRKILFNKRYFGKGRKDGGPGFEEEEHVDSIFILLKYVYAFSISDFIPPLRRLDLDGHQKKVREALNVMKKYHDPIVQERVKQWNDTPKMDEQDWLDILISLKDADNKPLLTMEEISAQIVEVLMAAVDNPSNAFEWALAEMINQPNLLQRAIEELDSVVGKERLVQESDIPKLNFVKACAREAFRLHPLADFNVPHVSMSDTTVGNYFIPNGSHVLLSRKGLGRNPKVWNEPLKFKPERHLTSDNGSNVVLTEPNLRFISFSTGRRGCPGVMLGTTMTVMLFARLLHGFTWTAPPNVSKINLVESNNEINLAEPLMAVAKPRLAPQLYHL 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g01527 531 CDD CYP79 77 524 - -
Viun10g01527 531 Pfam Cytochrome P450 43 507 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g01527 531 PANTHER CYTOCHROME P450 703A2-RELATED-RELATED 14 530 - -
Viun10g01527 531 FunFam Cytochrome P450 9 35 527 - -
Viun10g01527 531 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 462 471 IPR017972 GO:0005506|GO:0016705
Viun10g01527 531 SUPERFAMILY Cytochrome P450 43 523 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g01527 531 PRINTS E-class P450 group I signature 419 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g01527 531 PRINTS E-class P450 group I signature 315 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g01527 531 PRINTS E-class P450 group I signature 378 396 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g01527 531 PRINTS E-class P450 group I signature 459 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g01527 531 PRINTS E-class P450 group I signature 196 214 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g01527 531 PRINTS E-class P450 group I signature 335 361 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g01527 531 PRINTS E-class P450 group I signature 469 492 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g01527 531 Gene3D Cytochrome P450 34 527 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g01527 Viun-Chr10 30215369 30217106 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g01527 8 529 Cytochrome P450 AT4G39950 53.920 0.0 587
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g01527 - K14984 vra:106778952 894.034