Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g01526 ATGGAACATTCCCCTTCTCTTCTGTGGTCAAATCTTCAAAGCCTTTGGTTGTTTGTATCCTTTATCATTGTGCTAAAAGTTCTGATACCTAGCTTGACTCAGAAATGGTCCAAGAAACAAAAACCAAAACTTCCTCCAGGTCCCAAACCATGGCCTGTGGTGGGCAACCTTCCTGAGATGCTTGCAAACAAACCTGTTCATCGATGGATACACAATCTCATGAAACAAATGAACACTGAGATTGCATGCATCCGCCTCGGAAATACCTATGTTATCCCTGTCACATGTCCCACCATTGCCAGACAGTTTTTGAGTGAACACGATGCAACTTTTGCATCAAGATCACTAACCACTTGCACTGATCTCGTTAGTAGCGGGTATTTAACCACAATTTTAGTGCCATTTGGGGACCAATGGAAGAAAATGAAGAAACTCTTAACCACTGCTTTGCTTTCCTCACAAAATCACCTATTGCTCCATGACAAAAGGATTGAAGAAGCTGACAACACTATGTTCTATGTCTACAACAAAAGCAAAACTGTGAACAATGGTGTTACTGGCCTTGTGGACATCAGGAGTGTTGCAAGGCATTATTGTGGCAACGTTATGAGGAAAATCCTTTTTAATACAAGGTATTTTGGGAAGGGTAGAAAGGATGGAGGACCTGGTTTTGAGGAGGAAGAACATGTTGAGTCCGTCTTTGTTTTACTTAGGTATCTTTATGCTTTTTCTATTTCTGATTTTATCCCATGTTTGAGGAGACTTGACTTGGATGGACACCAGAAGAAGGTGAAGGAAGCTTTGAAAGTCATGAAGAAATATCATGATCCTATCATTCAAGAAAGAGTTAAACAATGGAATGATGCAGGAAAGATTGACGAAAAGGACTGGCTTGACATTTTGATCTCCTTGAAAGATGCCAACAATAATCCATTATTGACAATGGAAGAAATTAGTACACAAATTGTGGAAATACTGATTGCAACAGTGGACAATCCATCAAATGCTTTTGAATGGGCACTAGCTGAAATGATAAACCAACCAAGTTTGCTCCAACGAGCCACTGAAGAATTGGACAGTGTGGTGGGAAAAGAGAGGTTGGTTCAAGAATCAGATATACCAAAGCTTAACTTTGTAAAGGCCTGTGCAAGAGAGGCTTTTCGCCTTCATCCCTTGGCAGCTTTTAATGTTCCGCATGTCTCAATGAGTGATACAACTGTGGGGAATTACTTCATTCCAAAGGGTAGCCATGTAATACTAAGTAGAAGAGAACTTGGAAGAAACCCAAAAGTGTGGAATGAACCCCTCAAGTTTAAACCAGAACGTCACCTTAATGGGTCTAATGTAGTTTTGACAGAACCAAATTTGAGATTCATATCGTTTAGCACAGGAAGGCGTGGTTGTCCTGGAGTAATGCTTGGGACCACAATGACCGTCATGTTATTTGCTAGGTTGCTCCATGGCTTCACTTGGACCGCACCATCCACTGTTTCAAAAATAAACCTAGCTGAGTCCAAGGATCAATTAAATCTTGCAGAGCCACTTATGGCAGTTGCTAAGCCCAGATTAGCACCACAATTATATCACCTTTAA 1593 0.4087 MEHSPSLLWSNLQSLWLFVSFIIVLKVLIPSLTQKWSKKQKPKLPPGPKPWPVVGNLPEMLANKPVHRWIHNLMKQMNTEIACIRLGNTYVIPVTCPTIARQFLSEHDATFASRSLTTCTDLVSSGYLTTILVPFGDQWKKMKKLLTTALLSSQNHLLLHDKRIEEADNTMFYVYNKSKTVNNGVTGLVDIRSVARHYCGNVMRKILFNTRYFGKGRKDGGPGFEEEEHVESVFVLLRYLYAFSISDFIPCLRRLDLDGHQKKVKEALKVMKKYHDPIIQERVKQWNDAGKIDEKDWLDILISLKDANNNPLLTMEEISTQIVEILIATVDNPSNAFEWALAEMINQPSLLQRATEELDSVVGKERLVQESDIPKLNFVKACAREAFRLHPLAAFNVPHVSMSDTTVGNYFIPKGSHVILSRRELGRNPKVWNEPLKFKPERHLNGSNVVLTEPNLRFISFSTGRRGCPGVMLGTTMTVMLFARLLHGFTWTAPSTVSKINLAESKDQLNLAEPLMAVAKPRLAPQLYHL 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g01526 530 Pfam Cytochrome P450 45 506 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g01526 530 Gene3D Cytochrome P450 36 526 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g01526 530 CDD CYP79 79 523 - -
Viun10g01526 530 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 461 470 IPR017972 GO:0005506|GO:0016705
Viun10g01526 530 PANTHER CYTOCHROME P450 703A2-RELATED-RELATED 18 529 - -
Viun10g01526 530 FunFam Cytochrome P450 9 37 526 - -
Viun10g01526 530 SUPERFAMILY Cytochrome P450 45 522 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g01526 530 PRINTS E-class P450 group I signature 99 120 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g01526 530 PRINTS E-class P450 group I signature 337 363 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g01526 530 PRINTS E-class P450 group I signature 468 491 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g01526 530 PRINTS E-class P450 group I signature 380 398 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g01526 530 PRINTS E-class P450 group I signature 198 216 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g01526 530 PRINTS E-class P450 group I signature 421 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun10g01526 530 PRINTS E-class P450 group I signature 458 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g01526 Viun-Chr10 30190357 30192330 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g01526 8 528 Cytochrome P450 AT4G39950 54.302 0.0 587
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g01526 - K14984 vra:106778952 887.871