Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g01519 ATGGGAGATTTCTCTCGTGGCCATCGTTTCCCCCAAAGCCGCTTCCACAACCCCTTGTTGTTTTCAAACCCCTCACCGCCGGAGATAAGCCATCGTCACTGCTCAACATTTCCACAGAACTTCGTCGCGACTTCCTTCCCACTTCGATTGCGACCTAGCAACGACTCGACATTTCCAGTACTCCACCTTTCCACAACATCTCGTCATCAACCAAGACCAGCCCACCGGAGATCGACTCCCTCGCTGGAGATCGCAGAACTCATCGCTGCAAGTGGAGTTCCTCGCGACTTCCTTCGCCACACAGATTGGGCACCAACGCGTGCTTTGTTGAACAATGTCGAACAGGGTTTTGGATTTCGCTTTAGTCGCGATCCATTTCTCTCTCGTATTCACCGCACTGTATTATGTTGTGTCATTGCTTCTGATACTGATTGTGTTGTGATTTATCTGATTCTAACAAATGCAGCTCATGGGCATGAAATTGTTATTGAATGGCCAACAAGGATAAAGATAATTATTGGAGCGACTAAGGGCTTAAGCAACCTCCATAGCCAAGAGAACATTGTACATGGGAACCTCACATCAAGCAACGTACTATTGGATGAGCAAACAAAAGCCCACATAACAGATTTTGGTCTCTCAAGGGTGATGACAACTTCTACAAACACCAACATCATTGCTACTACAGGAAGCCTTGGCTACAATGCACCAGAGCTTTCCAAGACCAAGAAGCCTAACACAAAGACTGATGTGTACAGTCTTGGTGTCATCATGTTGGAACTCCTAACTGGAAAGCCATTTGGGATGATTTGCTTAGCACATTGA 825 0.4655 MGDFSRGHRFPQSRFHNPLLFSNPSPPEISHRHCSTFPQNFVATSFPLRLRPSNDSTFPVLHLSTTSRHQPRPAHRRSTPSLEIAELIAASGVPRDFLRHTDWAPTRALLNNVEQGFGFRFSRDPFLSRIHRTVLCCVIASDTDCVVIYLILTNAAHGHEIVIEWPTRIKIIIGATKGLSNLHSQENIVHGNLTSSNVLLDEQTKAHITDFGLSRVMTTSTNTNIIATTGSLGYNAPELSKTKKPNTKTDVYSLGVIMLELLTGKPFGMICLAH 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g01519 274 Gene3D Transferase(Phosphotransferase) domain 1 145 271 - -
Viun10g01519 274 SMART serkin_6 82 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun10g01519 274 SUPERFAMILY Protein kinase-like (PK-like) 153 266 IPR011009 -
Viun10g01519 274 ProSiteProfiles Protein kinase domain profile. 1 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun10g01519 274 Pfam Protein kinase domain 168 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun10g01519 274 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 155 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g01519 Viun-Chr10 29923067 29925118 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g01519 156 268 Receptor kinase-like Gene Family AT3G51740 62.832 4.78e-41 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Viun10g01519 Pkinase 8.5e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g01519 - - vun:114165508 556.984