Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g01510 ATGAAGGCCATGCCCTTGCCTTTTGAGGAATTTCAAGGGAAGGGATTGTTGGATTTCTCTTCGGCCTCAGATTCATTTTCACTGCTTTTGCATCATCCACAACCAAAGTGGACCATAGACAAAGAGGATTATTGCTATGTGGGCAGCACTGAGCCCACCTCAGTTCTTGACTCCAGAAGAAGCCCAAGCCCTCCCACTTCCTCCTCTACAATGTCCTCTTCTCTTGGCAGCAACAGCACCAGCAAGGGTGGTGGCAGTGGCACTTCAGCCACCACCACTACCACCACTGGTGCTGCAGCCCTTACACCCTCTGACAACAACAACAACAACCCTCCTCCTGATTCCAGCCCTGAAAAATGTGGCATCAGGATGGATGACTGGGAGGGTCAAGATCAATCCATTCTCAGGCTAATCATGGGGGATGTTGAAGACCCTTCTGCTGGATTGAGCAAGCTCTTGCAAAACACTGCCTGTCCCTCTCAAAGTGTTGATTTCAATGCAGGCTTTGGTGTTGTGGATCAAGGGTTGAATATGGTGAGTGCTGCTATTGACCCTTCAGGGAATTACCCTGCTGGTTTCCCTTTCATTGCTGAGAATATTGAATCCCACAATGGCAAGCCTGCTTCTGTGTCTGCCCAGGTTTCAGAATCTGTTGTTTTTTCTGCCAATAATCCTCTTATGGTGTCATCATCTGTGTCTCCTGGTGTGTTCTCTTCTCAGCAGCCGCAGCATGAGTTTGGAGTGGTGGATGAGAAGCCTCAGGTTATCAACCCCCAGTTCATGTTAAACCAGAACCAAGTTCAGTTCTCAGAGAACCCTTCTTTCTTTGTGCCAATGATGTATCCCCAGGTTCAGGAGCAGCAGGTTTTCCCTCAGCATCATCAAGCAAAACGCCCTCTCTTTGACACAATTGGGCACAATTATCAGGCTCCAAGGTTGCCCCTTTTGGATTCTGGGCAAGAGATGTTTGGCAGGAGGCAGCAAACACAGCTTCCATTATTTCCTCACCATATCCAACAGCAACAACAACAACAACAACATCAATCAATTGTTATGCCTTCTGCTAAACAGCAGAAGGTGAGTTCCGCCGGAGACGATGCAAGCCACCAGCTTCAGCAGGCTATATTTGATCAGTTATACAAAACTGCTGAGCTGATAGAAGCTGGTAATCCGGTTCATGCGCAAGGGATATTGGCGCGGCTCAATCACCAGCTCTCCCCAATTGGTAAGCCTTTTCAGAGGGCTGCTTTCTACATGAAGGAGGCCTTGATGTCACTGCTTCATTCAAATCCTCACACTTTCATGGCTTTCTCACCAATCAGTTTCATATTCAAAATCGGAGCTTACAAGTCCTTTTCTGAGATATCACCTGTTCTTCAGTTTGCCAATTTTACCTGTAACCAAGCCCTCATTGAAGCTGTAGAAAGGTTCGACCGAATTCATGTCATTGATTTTGATATTGGGTTCGGAGTGCAGTGGTCATCTTTCATGCAAGAAATTGCCTTGAGAAGCACTGCTACACCTTCCCTCAAAGTCACTGCCATTGTGTCACCCTCCACTTGTGATGAGGTTGAACTCAATTTTACCAAAGAAAATTTGATGCAATACGCCAAGGACATCAACGTGTCTTTTGAGTTCAGTGTTCTCAACATTGAATCATTGCACTCCCCTTCTTCTCCACTGCTTGGCCAGTTCTTTGACAATGAGGCCATTGCTGTGAACATGCCAGTTTCAAGTTTCACAAACAATCCATCGTTGTTCCCTTCAGCTCTTCACTTTGTGAAGCAGCTCAGGCCAAAGGTTGTGGTCACATTGGACAGAATCTGTGATCGAATTGACGTGTCACTTCCCACAAATGCAGTCCACGTTCTCCAATGTTATTCAGCCTTGTTGGATTCCCTGGACGCTGTGAATGTGAATCTTGATGTTCTTCAAAAGATTGAGAGGCATTTCATTCAACCAGCCATCAAGAAAATCATCCTTGGCCACCACCATTCTCAAGAGAAACTCCCTCCATGGAGAAACCTCTTTCTACAATCTGGATTTTCTCCATTCACATTCAGCAACTTCACTGAAGCTCAAGCTGAGTGTTTAGTTCAGAGGGCACCTGTGAGGGGATTTCACGTGGAAAGAAAGCCTTCATCTCTTGTTCTGTGCTGGCAGAGGAAAGAACTCATCTCTGTTTCTACTTGGAGATGCTGA 2202 0.4632 MKAMPLPFEEFQGKGLLDFSSASDSFSLLLHHPQPKWTIDKEDYCYVGSTEPTSVLDSRRSPSPPTSSSTMSSSLGSNSTSKGGGSGTSATTTTTTGAAALTPSDNNNNNPPPDSSPEKCGIRMDDWEGQDQSILRLIMGDVEDPSAGLSKLLQNTACPSQSVDFNAGFGVVDQGLNMVSAAIDPSGNYPAGFPFIAENIESHNGKPASVSAQVSESVVFSANNPLMVSSSVSPGVFSSQQPQHEFGVVDEKPQVINPQFMLNQNQVQFSENPSFFVPMMYPQVQEQQVFPQHHQAKRPLFDTIGHNYQAPRLPLLDSGQEMFGRRQQTQLPLFPHHIQQQQQQQQHQSIVMPSAKQQKVSSAGDDASHQLQQAIFDQLYKTAELIEAGNPVHAQGILARLNHQLSPIGKPFQRAAFYMKEALMSLLHSNPHTFMAFSPISFIFKIGAYKSFSEISPVLQFANFTCNQALIEAVERFDRIHVIDFDIGFGVQWSSFMQEIALRSTATPSLKVTAIVSPSTCDEVELNFTKENLMQYAKDINVSFEFSVLNIESLHSPSSPLLGQFFDNEAIAVNMPVSSFTNNPSLFPSALHFVKQLRPKVVVTLDRICDRIDVSLPTNAVHVLQCYSALLDSLDAVNVNLDVLQKIERHFIQPAIKKIILGHHHSQEKLPPWRNLFLQSGFSPFTFSNFTEAQAECLVQRAPVRGFHVERKPSSLVLCWQRKELISVSTWRC 733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g01510 733 ProSiteProfiles GRAS family profile. 366 732 IPR005202 -
Viun10g01510 733 MobiDBLite consensus disorder prediction 51 115 - -
Viun10g01510 733 Pfam GRAS domain family 377 732 IPR005202 -
Viun10g01510 733 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 345 728 IPR005202 -
Viun10g01510 733 MobiDBLite consensus disorder prediction 51 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g01510 Viun-Chr10 29684948 29688972 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g01510 374 733 GRAS Transcription Factor Family AT4G00150 54.821 5.97e-126 385
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Viun10g01510 GRAS 3.7e-90 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g01510 - - gmx:100801785 1189.87