Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g01507 ATGAAGGCCATGCCCTTTCCTTTTGAGGAGTTTCAAGGGAAGGGAGTGTTGGATTTTTCTTCAGGCTCAGATTCACTTTCATTGCTTTTGCATCATCCACAACCAAAGTGGACCATAGACAAAGAGGATTATTGCTATGTGGGCAGCACTGAGCCCACCTCAGTTCTTGACTCCAGAAGAAGCCCAAACTCTTCCACCATGTCCTCTTCCCTTGGCAGCAGCAACACCATCAGCAAGGGTGGCAGTGGTGGTGGTTCAACCAATAACACCACTTGTTACACCCCAACCCTTTCTCACAACCCTCCTCAGACACCATTGGAAACCGCCACAGAAAAATGTGGACTCAGAATGGAGGACTGGGAGACCCAAGATCAATCAATTCTCAGACTAATCATGGCAGATGCCGAAGACCCTTCTGTAGGGTTGAGCAAGCTCTTCCAGGGCACTGCCTGTGGCTCTCACCAAACCCTTGATTTCAATGCAGGTTTTGGCGTTGTGGATCAAGGGTTGAATATGCAAGTGATTGGAGAGGTGGATGAGAAGCCTCAAGTCATCAATCCCCAGTTTGAGTTAAACCAGACCCAAGTTCAATTCTCTGAGAACAACCCTTCTTTCTTTGTGCCAATGATGTATCCCCAATTGCAGGAACAGCAAGTTTTCTCTCAGCATCCACCAAAACGCCCTGGTTTTGAGCCTTCTGGGCACAGTTTTCAGGCTCCAAGGTTGCCCCTTTTGGATTCTGGACAAGACATGTTTGGTCGGAGGCAACAAACACAGCTTCCATTGTTTCCTCACCACATGCCACCACAGATTGTGCCATCTGCTAAACCGCAGAAGGCTAGTTCCACCGGAGAAGATGCAAGCCAGCAGCTTCAGCAGGCTATATTTGACCAGTTATACAAAACTGCTGAGCTGATAGAAGCTGGGAATCCGGTTCATGCGCAAGGGATATTGGCGCGGCTCAATCACCAGCTCTCCCCAATTGGTAGGCCTTTTCAGAGGGCTGCTTTCTACATGAAAGAGGCTTTGATGTCTCTGCTTCATTCAAATCCTCACAACAATGTCTTGGCTTTCTCACCCATCACTTCCATTTTCAAAATCGGAGCATACAAGTCCTTTTCTGAGATTTCACCAGTCATTCAGTTTGCCAACTTCACCAGCAACCAAGCCATCATTGAAGCCTTGGAAAGGTTCGATCGGATTCACATCATCGATTTTGATATTGGGTTTGGAGTTCAATGGTCTTCTTTCATGCAAGCACTTGCCATGAGGAGTAATGGTGTGCCTTCCCTCAAAATCACTGCCATTGTGTCTCCCCTCTCTTATGATGAGTTTGAGCTCAATGTGACTCAAGAAAAGTTGAACCAATACGCCAAAGACATCAACATGTCTTTTGAGCTCAATGTCTTGAGCATCGAGTCACTGAGCTCTCCCTCATGTCCTCTCTCTGTTCAGTACTATGATAATGAAGCAACTGCTGTGAACATGCCACTTTCCTGCTTCACAAACTACCCTACATTGTTTCCCTTGGTCCTTCGCTTTGTGAAGCAGCTTAGGCCAAAAGTTGTAGTCACTCTTGACAGAAATTGTGACCAATTGGATGCACCATTTTCCACCAACATAGTCCATGCTCTCCATTGTTACTCAGCCTTGCTTGAATCACTTGATGCTGTGAATGTGAACCTCGATGTCCTCCAAAAGATTGAAAAACATTTCATCTTACCAGCCCTTAAGAAAACCATAACATGCCCCCTCCGTTCACAGGAAAAACTACCTTCTTGGAGGAACATGTTTCTTCAATATGGCTTCTCTCCATTCACATTTAGCAACTTCACTGAAGCTCAAGCTGAGTGCTTGGTGCAGAAGGCACCTGTGAGGGGATTCCAATTGGAGAGAAAGCACTCATCTCTTGTTCTTTGCTGGCAGAGGAAAGAACTCATCACAGTTTCAACTTGGAGATGCTGA 1965 0.4626 MKAMPFPFEEFQGKGVLDFSSGSDSLSLLLHHPQPKWTIDKEDYCYVGSTEPTSVLDSRRSPNSSTMSSSLGSSNTISKGGSGGGSTNNTTCYTPTLSHNPPQTPLETATEKCGLRMEDWETQDQSILRLIMADAEDPSVGLSKLFQGTACGSHQTLDFNAGFGVVDQGLNMQVIGEVDEKPQVINPQFELNQTQVQFSENNPSFFVPMMYPQLQEQQVFSQHPPKRPGFEPSGHSFQAPRLPLLDSGQDMFGRRQQTQLPLFPHHMPPQIVPSAKPQKASSTGEDASQQLQQAIFDQLYKTAELIEAGNPVHAQGILARLNHQLSPIGRPFQRAAFYMKEALMSLLHSNPHNNVLAFSPITSIFKIGAYKSFSEISPVIQFANFTSNQAIIEALERFDRIHIIDFDIGFGVQWSSFMQALAMRSNGVPSLKITAIVSPLSYDEFELNVTQEKLNQYAKDINMSFELNVLSIESLSSPSCPLSVQYYDNEATAVNMPLSCFTNYPTLFPLVLRFVKQLRPKVVVTLDRNCDQLDAPFSTNIVHALHCYSALLESLDAVNVNLDVLQKIEKHFILPALKKTITCPLRSQEKLPSWRNMFLQYGFSPFTFSNFTEAQAECLVQKAPVRGFQLERKHSSLVLCWQRKELITVSTWRC 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g01507 654 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 275 649 IPR005202 -
Viun10g01507 654 Pfam GRAS domain family 297 653 IPR005202 -
Viun10g01507 654 MobiDBLite consensus disorder prediction 52 104 - -
Viun10g01507 654 ProSiteProfiles GRAS family profile. 286 653 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g01507 Viun-Chr10 29642846 29646054 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g01507 4 654 GRAS Transcription Factor Family AT4G00150 42.556 9.99e-137 410
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Viun10g01507 GRAS 1.3e-93 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g01507 - - pvu:PHAVU_010G072700g 1163.29