Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g01506 ATGAAGGCCATGCCCTTTCCTTTTGAGGAGTTTCAAGGGAAGGGAGTGTTGGATTTTTCTTCAGGCTCAGATTCACTTTCATTGCTTTTGCATCATCCACAACCAAAGTGGACCATAGACAAAGAGGATTATTGCTATGTGGGCAGCACTGAGCCCACCTCAGTTCTTGACTCCAGAAGAAGCCCAAACTCTTCCACCATGTCCTCTTCCCTTGGCAGCAGCAACACCATCAGCAAGGGTGGCAGTGGTGGTGGTTCAACCAATAACACCACTTGTTACACCCCAACCCTTTCTCACAACCCTCCTCAGACACCATTGGAAACCGCCACAGAAAAATGTGGACTCAGAATGGAGGACTGGGAGACCCAAGATCAATCAATTCTCAGACTAATCATGGCAGATGCCGAAGACCCTTCTGTAGGGTTGAGCAAGCTCTTCCAGGGCACTGCCTGTGGCTCTCACCAAACCCTTGATTTCAATGCAGGTTTTGGCGTTGTGGATCAAGGGTTGAATATGGTAAGCATTGTTGATCCTTCAGGGAATAATTACCCTGCTTTCCCTTTCATTGCTGAGAATATAGATAACAAGACTGCTTCTTTGTCTGTTGGAGAATCAATGTTTTCTGTTTCTGGTAACAATTCTCTGTTGTTGTCCACATCTCCTTGTGGGTTTAACTCTCAGCAGCAAGTGATTGGAGAGGTGGATGAGAAGCCTCAAGTCATCAATCCCCAGTTTGAGTTAAACCAGACCCAAGTTCAATTCTCTGAGAACAACCCTTCTTTCTTTGTGCCAATGATGTATCCCCAATTGCAGGAACAGCAAGTTTTCTCTCAGCATCCACCAAAACGCCCTGGTTTTGAGCCTTCTGGGCACAGTTTTCAGGCTCCAAGGTTGCCCCTTTTGGATTCTGGACAAGACATGTTTGGTCGGAGGCAACAAACACAGCTTCCATTGTTTCCTCACCACATGCCACCACAGATTGTGCCATCTGCTAAACCGCAGAAGGCTAGTTCCACCGGAGAAGATGCAAGCCAGCAGCTTCAGCAGGCTATATTTGACCAGTTATACAAAACTGCTGAGCTGATAGAAGCTGGGAATCCGGTTCATGCGCAAGGGATATTGGCGCGGCTCAATCACCAGCTCTCCCCAATTGGTAGGCCTTTTCAGAGGGCTGCTTTCTACATGAAAGAGGCTTTGATGTCTCTGCTTCATTCAAATCCTCACAACAATGTCTTGGCTTTCTCACCCATCACTTCCATTTTCAAAATCGGAGCATACAAGTCCTTTTCTGAGATTTCACCAGTCATTCAGTTTGCCAACTTCACCAGCAACCAAGCCATCATTGAAGCCTTGGAAAGGTTCGATCGGATTCACATCATCGATTTTGATATTGGGTTTGGAGTTCAATGGTCTTCTTTCATGCAAGCACTTGCCATGAGGAGTAATGGTGTGCCTTCCCTCAAAATCACTGCCATTGTGTCTCCCCTCTCTTATGATGAGTTTGAGCTCAATGTGACTCAAGAAAAGTTGAACCAATACGCCAAAGACATCAACATGTCTTTTGAGCTCAATGTCTTGAGCATCGAGTCACTGAGCTCTCCCTCATGTCCTCTCTCTGTTCAGTACTATGATAATGAAGCAACTGCTGTGAACATGCCACTTTCCTGCTTCACAAACTACCCTACATTGTTTCCCTTGGTCCTTCGCTTTGTGAAGCAGCTTAGGCCAAAAGTTGTAGTCACTCTTGACAGAAATTGTGACCAATTGGATGCACCATTTTCCACCAACATAGTCCATGCTCTCCATTGTTACTCAGCCTTGCTTGAATCACTTGATGCTGTGAATGTGAACCTCGATGTCCTCCAAAAGATTGAAAAACATTTCATCTTACCAGCCCTTAAGAAAACCATAACATGCCCCCTCCGTTCACAGGAAAAACTACCTTCTTGGAGGAACATGTTTCTTCAATATGGCTTCTCTCCATTCACATTTAGCAACTTCACTGAAGCTCAAGCTGAGTGCTTGGTGCAGAAGGCACCTGTGAGGGGATTCCAATTGGAGAGAAAGCACTCATCTCTTGTTCTTTGCTGGCAGAGGAAAGAACTCATCACAGTTTCAACTTGGAGATGCTGA 2133 0.4571 MKAMPFPFEEFQGKGVLDFSSGSDSLSLLLHHPQPKWTIDKEDYCYVGSTEPTSVLDSRRSPNSSTMSSSLGSSNTISKGGSGGGSTNNTTCYTPTLSHNPPQTPLETATEKCGLRMEDWETQDQSILRLIMADAEDPSVGLSKLFQGTACGSHQTLDFNAGFGVVDQGLNMVSIVDPSGNNYPAFPFIAENIDNKTASLSVGESMFSVSGNNSLLLSTSPCGFNSQQQVIGEVDEKPQVINPQFELNQTQVQFSENNPSFFVPMMYPQLQEQQVFSQHPPKRPGFEPSGHSFQAPRLPLLDSGQDMFGRRQQTQLPLFPHHMPPQIVPSAKPQKASSTGEDASQQLQQAIFDQLYKTAELIEAGNPVHAQGILARLNHQLSPIGRPFQRAAFYMKEALMSLLHSNPHNNVLAFSPITSIFKIGAYKSFSEISPVIQFANFTSNQAIIEALERFDRIHIIDFDIGFGVQWSSFMQALAMRSNGVPSLKITAIVSPLSYDEFELNVTQEKLNQYAKDINMSFELNVLSIESLSSPSCPLSVQYYDNEATAVNMPLSCFTNYPTLFPLVLRFVKQLRPKVVVTLDRNCDQLDAPFSTNIVHALHCYSALLESLDAVNVNLDVLQKIEKHFILPALKKTITCPLRSQEKLPSWRNMFLQYGFSPFTFSNFTEAQAECLVQKAPVRGFQLERKHSSLVLCWQRKELITVSTWRC 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g01506 710 Pfam GRAS domain family 353 709 IPR005202 -
Viun10g01506 710 ProSiteProfiles GRAS family profile. 342 709 IPR005202 -
Viun10g01506 710 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 329 705 IPR005202 -
Viun10g01506 710 MobiDBLite consensus disorder prediction 52 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g01506 Viun-Chr10 29642846 29646055 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g01506 350 710 GRAS Transcription Factor Family AT4G00150 54.945 8.04e-129 391
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Viun10g01506 GRAS 1.6e-93 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g01506 - - pvu:PHAVU_010G072700g 1128.24