Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g01476 ATGTTGCACGTGTTCCACCATTCAATTTCCAAGCAGAGCAAAATCTTCTATCTCAGTCAATTTCCATTTGTGTCAAATTTGACCCTTGTTCGCTCCGGACCAGAGACAGCACAAGAAGGGAAGATCCTTTTGTTTTTGTTTTGCAGAGGTTTTCATTCTTGGAAAGACTTTTGGATAGGTAATATCCATCTTCTGTGCATCCTTCCAAGCAGCCACACAAGAGCAATGGGAATAGAGATTGTGGAGCCTAACACATGCATCAGGGGTTGCTGCACCAACCCCTCTATTCCCCTTCATCTCCCTCCAGCTTCTTATACTCTCCTCTCTCCTATTGCTCGAGGGGCTGAGAGTGTTGTTTATGAAGGGACTTTGGATGGCACGAGGGTTGCTGTGAAGAAACCCATCTTGTCAACTTCAGAAGACATTAATAAGTTTCATAAAGAATTGCAATTGCTGTGCAAGTTAGATCACCCGGGAATAGCGACATTGATTGCGGCGCATGCAAAACCGCCCAATTACATGTTTTTCTTCAAGTTATATGAATCTCGGAATCTTGCACAGAAGTTGCATGTAGAAGAGTGGATACCTACTCTCAATGATGCACTTATGATGGCAATGCAATTAGCCAAGGCTTTGCAATATCTGCATAACCTCGGGATTGTGCATAGAGATGTGAAACCGGCAAATATTCTCCTTGACAAAAGTCTTTGTCCACACCTCACAGATTTTGGTTTGGCAGAATACAAGAATGATCTTAAGGGAGTTTCTGTTCAGAATTGGAAGTCTTCTGGAAAGCCTACTGGTGGTTTCCACAAAAAGAATATGGTTGGAACACTCATTTACATGGCACCTGAAATATTAAGAAAGGAGTTACATACAGAAAAATCTGATGTATACAGTTTCGGGATATCAATCAACGAACTCCTTACTGGTGTTGTGCCGTATACAGATCTTCGTACAGAAGCTCAAGCTCACACAGTGCTTGAAATGAACTATACAGAGCAGCAACTAACAGCAGCTGTTGTTTCTTATGGATTACGGCCCGTACTTGCTACTGAGGACTTGGGTATACCGTCCAGATTATTATCAATGATTAACAACTGCTGGGAAGGAAATCCTAATAACAGACCCACTTTTGATGAAATAGTCAAGGAACTTGATTTGATTATGGAGCACTGCAAATTAAAGAAGGCAGAAGATATTTATGTCAGACCTGTTAACTTGCATGTTGATCAACCTGTGGACAAGACTGAACACCTTCAGGCTTATCAAGAGAGTTTTAGTTGGTCCACTCGTGGTGAACTTTTGACTGCCTCTAGTGCAAATAATTCTGGTTTGATAACTAGGTGTGAGTTTTATGACAAGGCTTCTGTATACCACCCAATACTGTCTTGGGGATCTTATGCTACCTGTGGGAGAAGGGAGACTATGGAGGATACACATTTCATTCTGCCCCGTATTTGTGATGAGAAGGATGTCTATGCTTTTGGCATCTTTGATGGCCATAGGGGTGCAGCTGCTGCTGAGTTTTCTTCTAGAGCTGTACCAGCTGTTTTGCAGACTTCAGGTTTTATGGGCAGTCCTGCTAATGCACTAGTGGAAGCATTCATTAGGACAGATGCTGCCTTCAGAAAAGAGCTTGATTCTTATCGCAAATCCAACAGATGTATCCAGAAGGACTGGCATCCTGGGTGTACAGCCATTGCTGCTCTTATAGTCAGAAACAAGCTATTTGTTGCTAACGTTGGTGATTGCAGGGCAATCATATGTCGTGCTGGTAATCCAATTTCCTTAAGTAAGGATCACGTTGCAAGCTGTCCTCAAGAGAGAGAACGTGTTATTCGTCAAGGGGGGCATGTACATTGGCAAGTTGACACTTGGAGGGTTGGTCTTCCTGCACTTCAGGTTACACGTTCTATTGGCGATGATGATCTGAAGCCTGCTGTCACTGCAGAACCTGAGATAACTGAAAATACCTTGTGCCCAGATGATGAGTTTCTGGTCATGGCTAGTGATGGCCTGTGGGATGTGATAAGCAGTACAGAGGTCATAAATATCATAAAAGATACTGTTAAAGAGGCTGGAATGTGTTCTAAGAGGTTGGCTACTGAAGCAGTGGAACGTGGCAGCAAAGATAACATAACAGTTATCGTTGTTTTCTTACGTCCTGTGTCCACAGCAGAGAGAATTTATTAG 2196 0.4281 MLHVFHHSISKQSKIFYLSQFPFVSNLTLVRSGPETAQEGKILLFLFCRGFHSWKDFWIGNIHLLCILPSSHTRAMGIEIVEPNTCIRGCCTNPSIPLHLPPASYTLLSPIARGAESVVYEGTLDGTRVAVKKPILSTSEDINKFHKELQLLCKLDHPGIATLIAAHAKPPNYMFFFKLYESRNLAQKLHVEEWIPTLNDALMMAMQLAKALQYLHNLGIVHRDVKPANILLDKSLCPHLTDFGLAEYKNDLKGVSVQNWKSSGKPTGGFHKKNMVGTLIYMAPEILRKELHTEKSDVYSFGISINELLTGVVPYTDLRTEAQAHTVLEMNYTEQQLTAAVVSYGLRPVLATEDLGIPSRLLSMINNCWEGNPNNRPTFDEIVKELDLIMEHCKLKKAEDIYVRPVNLHVDQPVDKTEHLQAYQESFSWSTRGELLTASSANNSGLITRCEFYDKASVYHPILSWGSYATCGRRETMEDTHFILPRICDEKDVYAFGIFDGHRGAAAAEFSSRAVPAVLQTSGFMGSPANALVEAFIRTDAAFRKELDSYRKSNRCIQKDWHPGCTAIAALIVRNKLFVANVGDCRAIICRAGNPISLSKDHVASCPQERERVIRQGGHVHWQVDTWRVGLPALQVTRSIGDDDLKPAVTAEPEITENTLCPDDEFLVMASDGLWDVISSTEVINIIKDTVKEAGMCSKRLATEAVERGSKDNITVIVVFLRPVSTAERIY 731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g01476 731 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 98 388 - -
Viun10g01476 731 SUPERFAMILY Protein kinase-like (PK-like) 98 413 IPR011009 -
Viun10g01476 731 Pfam Protein kinase domain 105 384 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun10g01476 731 Pfam Protein phosphatase 2C 469 714 IPR001932 -
Viun10g01476 731 Gene3D Transferase(Phosphotransferase) domain 1 98 418 - -
Viun10g01476 731 CDD PP2Cc 466 721 IPR001932 -
Viun10g01476 731 SMART PP2C_4 454 719 IPR001932 -
Viun10g01476 731 ProSiteProfiles Protein kinase domain profile. 105 395 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun10g01476 731 FunFam Protein kinase and PP2C-like domain-containing protein 95 419 - -
Viun10g01476 731 ProSiteProfiles PPM-type phosphatase domain profile. 464 721 IPR001932 -
Viun10g01476 731 FunFam Leucine rich repeat protein phosphatase 2c domain containing protein 455 725 - -
Viun10g01476 731 SMART PP2C_SIG_2 479 721 IPR001932 -
Viun10g01476 731 SUPERFAMILY PP2C-like 456 723 IPR036457 -
Viun10g01476 731 SMART serkin_6 105 389 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun10g01476 731 ProSitePatterns Serine/Threonine protein kinases active-site signature. 220 232 IPR008271 GO:0004672|GO:0006468
Viun10g01476 731 Gene3D - 455 726 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g01476 Viun-Chr10 29214615 29231192 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g01476 174 731 PP2C-type Phosphatase Gene Family AT2G40860 63.815 0.0 739
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-3 Viun10g01476 Pkinase 6.1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g01476 - - vun:114166829 1483