Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g01448 ATGGGGTGTTTCACTGTGCTGAAACACAAGAAGGAAAAGATCAATAAAATCAGATACACAAAATGTGTGAGCCATATTGAGCATGTTCCTACAGTACTCCCTGAACCTCAAACTCATACTCGTACCCTGCAATCTGCACCTTCTAGTTTCCGGAATAGAGTGAAATCCACTCACCCCATTAACAAAATCACCAATCACAGAACACGAACATTATCTGCTCCATCAGCTCTTGATGTGGCCAGACAAGATACTCTTACCACAGTCGAGTTCGAGGATCAAGAGGAATCAAGATACAATGTGGGATCACTGAAGGGGCAGCATTCATCTAATCCACTACCTTTACCACTTCCATCACACCAGGGTGGTGGTGAATTGAAAGCTACTGGAAGCTTTAAATCAGGAATAGTTGCTGGTTCTGTGTATGCTCCTGATGCTGCAGAACATGATGCTTTGGCCACAGTTGAGTATGAGGAACAAGAAGAGTCAAAAAACCGAGTTGGGTTGGTTAAGGATCATTGTTCAACTAATTCACAACCTTTGCCTCTTCCATCTCGTCAAGGTGGTGGTGCTGCATTGAAGGCTAATGTCAGCTTTAAGATGGGAATGGCTACACCTCTTGTGTATGCTTGCGGACCTTTGCCTCTTCCCCCTACCGGGTTGCTTAGAAACTTACTGTTTGAGGAGATTGCTGCTGCGTGTCACAACTTCTCTTCTGATCGATGCATGTCTGAATGTCTTTCTTCTACCATATACAGCGCTTCATTTGGTGATGATGCTTCAAGTGCAAAGAAGTTTGAAGCCACTGTCACTCGCCTTCATTCTTCAACTCAGGGATTGAAGGAATTCATAAATGATGTGAATACCCTTGCATCTTTGCAACATCCGAACCTCTGTAAATTGCTAGGATTTCATGCCCGTGATGGTTCTGAACCAAGGATGTTGGTTTATGAGAGGCTATACCATGGAAGCTTGGACCAGCAGTTGTTTGGGAGATCTGATGGCCATTCAATTGATTGGAACTCACGAATGAAAGTTGCCATATGTGCTGCACAAGGTCTTACTTTCTTGCATGAAGAAGGGCCTTTCCAGGCGATGTATAATGAATTTTCAGCAGCCAACATACAGATTGACAAAGATTTCAGTGCAAAGCTTTCTGGGTATGGTTGTGTGGGACGAATTCCCGAGGAAGAGATTTCTAGCAGTACATGTGCTGTTGGAAACCTGTCTGTGGAGACACTGGAAAGGGGAATTCTTACTCCAAAGAGCTATGTATGGGGTTTTGGAATTATTCTTTTGGAGCTACTTACTGGCAGAAAGAATGTGGATAGTCACCACCCCAAGGAAGAGAGGAACTTGGTGAAGTGGAGCCGGCCTTTCCTGGCCGATGATTTTCGACTGTCGCTGATTATGGATCCTCATCTTAAAGGTCGATATCCTCCCAAGGCAGCAAGAGCAGTAGCTGACATTGCACAAAGATGCCTCCAAAAGGAGCCATCAGAAAGACCCCCCATGAGAACCATTGTTGAGCATCTCAAAGTGGTTCAAGATATGAAGTACTCATGTTGGTTTCCTCTGCAAGAGCCAGCAAAACAAATGTCAAGATCACCGAGTCTTAATGGTGTCAAATGTCTCACTCCTACATTGAGTTTCTCTCCCTCAACAGCACCGGTGGCTAGACCATCTGTTTCATCTCCAAGATGGTGTGCTGTGCCCACATTGCATCTTCCTCTTGGCGCTTGTTCCTCCACTTTCAACATGGATGACCATGTTAGGCCGGAAAGCCGGAAGTCCATCCTCAATGTGTAG 1806 0.4502 MGCFTVLKHKKEKINKIRYTKCVSHIEHVPTVLPEPQTHTRTLQSAPSSFRNRVKSTHPINKITNHRTRTLSAPSALDVARQDTLTTVEFEDQEESRYNVGSLKGQHSSNPLPLPLPSHQGGGELKATGSFKSGIVAGSVYAPDAAEHDALATVEYEEQEESKNRVGLVKDHCSTNSQPLPLPSRQGGGAALKANVSFKMGMATPLVYACGPLPLPPTGLLRNLLFEEIAAACHNFSSDRCMSECLSSTIYSASFGDDASSAKKFEATVTRLHSSTQGLKEFINDVNTLASLQHPNLCKLLGFHARDGSEPRMLVYERLYHGSLDQQLFGRSDGHSIDWNSRMKVAICAAQGLTFLHEEGPFQAMYNEFSAANIQIDKDFSAKLSGYGCVGRIPEEEISSSTCAVGNLSVETLERGILTPKSYVWGFGIILLELLTGRKNVDSHHPKEERNLVKWSRPFLADDFRLSLIMDPHLKGRYPPKAARAVADIAQRCLQKEPSERPPMRTIVEHLKVVQDMKYSCWFPLQEPAKQMSRSPSLNGVKCLTPTLSFSPSTAPVARPSVSSPRWCAVPTLHLPLGACSSTFNMDDHVRPESRKSILNV 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g01448 601 MobiDBLite consensus disorder prediction 93 125 - -
Viun10g01448 601 MobiDBLite consensus disorder prediction 99 115 - -
Viun10g01448 601 Pfam Protein tyrosine and serine/threonine kinase 259 511 IPR001245 GO:0004672|GO:0006468
Viun10g01448 601 Gene3D Transferase(Phosphotransferase) domain 1 319 522 - -
Viun10g01448 601 ProSiteProfiles Protein kinase domain profile. 236 513 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun10g01448 601 PANTHER OS01G0588500 PROTEIN-RELATED 161 515 - -
Viun10g01448 601 Gene3D Phosphorylase Kinase; domain 1 218 317 - -
Viun10g01448 601 SUPERFAMILY Protein kinase-like (PK-like) 219 522 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g01448 Viun-Chr10 28851283 28855462 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g01448 211 515 Receptor kinase-like Gene Family AT4G02010 36.656 2.60e-51 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-II Viun10g01448 PK_Tyr_Ser-Thr 1e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g01448 - - aprc:113849641 884.019