Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g01431 ATGTACAAGGGTAGATTAGGAGGAAAAGCTCTTCTTGGATATGTTGAAACTGACCCTTCTGGTAGATATGGTCGTTTCAGGGACATTCTTGGCAAAGGAGCAGTGAAGATTGTGTATAGGGCATTTGATGAAGTCCTTGGAATAGAGGTGGCTTGGAACCAAGTTAAGCTTGGTGATGTATTTCATTCACCAGATCTTCTTCAACGCCTTTACTCAGAGGTTCATCTCCTCAAGGACTTGGAACATGACTCCATCATGACCTTCCATGACTCTTGGATTGATGTCAATTATAGAACCTTCAACTTCATCACTGAATTGTTCACCTCTGGCACCCTAAGAGAGTACAGAAAGAAGTATCAGAGAGTAGATATCAGAGCAGTGAAGAACTGGGCACGCCAGATTCTAACTGGTTTGGAGTATTTGCATAGCCATGATCCTCCTGTGATACATAGAGACCTCAAGTGTGACAATATCTTCATCAATGGCCATCTGGGGCAGGTCAAGATTGGTGATTTGGGCCTTGCAGCCATTCTTCGTGGCTCCCAACATGCACACAGTGTCATAGGTACACCAGAATTTATGGCACCAGAATTGTATGAAGAGGAATACAATGAACTGGTTGACATATACTCCTTTGGAATGTGCATGATAGAAATGTTTACTTCTGACTTCCCATACAGCGAGTGCTCCAACCCAGCTCAAATATACAAGAAAGTTACTTCAGGGAAGCTGCCAGAAGCCTTTTACAGAATCCATGACTTGGAAGCTCAGAGGTTTGTGGGAAAGTGTTTGGCAAATGTCTCAGAGAGGTTGTCAGCAAAGGAGCTCTTGTTGGACTCATTTTTAGCCAAGGACCAACTAGACTCCCCACTCTCTAGCCCGACATTACCCAGAAAACAAACCCCCACACTCAATTTCATTGCACCACTGGCCAAAGGGATACCACCAATGAGTGACCAAACAAAGGACACACACATGACCATCACAGGATCAATCAATGAAGATGATGACACAATTTTCCTTAAAGTACAAATTTCTAACAAAAGTGGGGAAAAGAGGAATATATTCTTTCCATTTGACACCATAAACGACACTGCAATTGATGTGGCAGTGGAGATGGTTAAAGAACTTGAAATTAGTGACTTGGAACCATTAGAGATTGCTGAAATGATTGAGGAAGAGATATCAGCTTTAGTCCCAACATGGAGGGACTGGGGCACTTCTAAGTATGAAAGACAACATAGTTTTAGCTATGAAGATGAGTGTGATATGAGTAACCACCACTCATACATCTCACCATCTTCTCGCTCTTCCTCTCATGGTTCTTCCCACAAGAATAATTCCCACCTCTGTGGGAACCATTACCCTTTTGCTCAAGATTGGCCTCAGGATGAACTATTTATGAATGATGATGCGAGCTCTCAAAGCTCAATGAACTCCTTCAAGTGCTTCAATCTCAAGTACTGTGACCCTGGCAATGAAGATGGGTATGATCCAGCTGCAGTGGTAGGAGCAGAAGCCCTTTGCTACTCTCCAAAAGGCAACGAAAAGTGCACAAGATTCTGTCCTCGAGAAGAAGTGATGGATGCTGATTGCACCAAACAGTTTTGCAACATGAAAATGGATTCTTCTCAGAGGTATCATGGAGTCCAGAGGCTAACAAGGATTCGTTCCTTTGTGGATCTGAGGAGACAACAACTGCAACGATCACTGATGGAAGAGATTCACAAGAGGAGAATCTTCAAGACGGTTGGTGCCATTGAGAACATTGGTTTTCAAAATCCAGAGGGAGCTGGGAGTTTTTTATTTTGA 1812 0.431 MYKGRLGGKALLGYVETDPSGRYGRFRDILGKGAVKIVYRAFDEVLGIEVAWNQVKLGDVFHSPDLLQRLYSEVHLLKDLEHDSIMTFHDSWIDVNYRTFNFITELFTSGTLREYRKKYQRVDIRAVKNWARQILTGLEYLHSHDPPVIHRDLKCDNIFINGHLGQVKIGDLGLAAILRGSQHAHSVIGTPEFMAPELYEEEYNELVDIYSFGMCMIEMFTSDFPYSECSNPAQIYKKVTSGKLPEAFYRIHDLEAQRFVGKCLANVSERLSAKELLLDSFLAKDQLDSPLSSPTLPRKQTPTLNFIAPLAKGIPPMSDQTKDTHMTITGSINEDDDTIFLKVQISNKSGEKRNIFFPFDTINDTAIDVAVEMVKELEISDLEPLEIAEMIEEEISALVPTWRDWGTSKYERQHSFSYEDECDMSNHHSYISPSSRSSSHGSSHKNNSHLCGNHYPFAQDWPQDELFMNDDASSQSSMNSFKCFNLKYCDPGNEDGYDPAAVVGAEALCYSPKGNEKCTRFCPREEVMDADCTKQFCNMKMDSSQRYHGVQRLTRIRSFVDLRRQQLQRSLMEEIHKRRIFKTVGAIENIGFQNPEGAGSFLF 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g01431 603 ProSitePatterns Serine/Threonine protein kinases active-site signature. 148 160 IPR008271 GO:0004672|GO:0006468
Viun10g01431 603 Gene3D Transferase(Phosphotransferase) domain 1 107 288 - -
Viun10g01431 603 FunFam Probable serine/threonine-protein kinase WNK1 9 105 - -
Viun10g01431 603 SMART serkin_6 24 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun10g01431 603 FunFam probable serine/threonine-protein kinase WNK9 107 287 - -
Viun10g01431 603 SUPERFAMILY Protein kinase-like (PK-like) 26 314 IPR011009 -
Viun10g01431 603 CDD STKc_WNK 22 282 - -
Viun10g01431 603 Pfam Protein kinase domain 28 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun10g01431 603 ProSiteProfiles Protein kinase domain profile. 24 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun10g01431 603 Gene3D Phosphorylase Kinase; domain 1 12 105 - -
Viun10g01431 603 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 15 476 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g01431 Viun-Chr10 28612181 28616676 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g01431 12 423 MAP Kinase Kinase Kinase AT3G51630 69.231 0.0 582
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Viun10g01431 Pkinase 2.5e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g01431 K08867 - gmx:100816187 1046.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g01184 5 8337507 8341233 Viun10g01431 10 28612181 28616676 PCT