Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g01429 ATGGGGAATCACAGGTTTAGATTATCAGATATGATTCCAAATGCTTGGTTTTACAAGCTGAGAGATATGGGGAAGGGAAGAAAGCAAAACACCACTCTCTCTGGGAAAAAGAAGCAAACTTCAATCACTTCAACCGCTTCAACCACACATTCATCAAAACCAAACCAACCCCTTCACCAATACAGCAACAACAACAACAACAACCCCAGAAAGTCCTACTACATCACAAGAGACCTCAAAAACTCACCCTCAAACACCCCGAAATTTTCCCCTCCCAGAAAATCAACCAAACAAAGAACCAAAAGAAGAGCTCCAAGAACCTCAAAACTTGTCTCCTCGGGTTGCAGCTGTCGCAGCACCCTTGAATCCATGTGGACCAAATCAGATTCACCGCTGGAACACTCTTCCTCATCCCCATTTGACTCCTCACCCGAGTCAGACTCCCCAGAATTCAGAACAGACCGTGTTCTCCCGTGTTCTTCATCGTTCGATGAAATGGTTTCCTTGTCAACCACCTCTTGCGCCTCTTGCAGGCTTAACACCAACAAAAACAACCACCCCACCAACGACATCATCATCGACGTCGATAAAAACTCCATACCAAGAAAGGATAACAAGCTTGATGGCTACTACAGTTACCACAACGACGACGACAACAAAAACAGCCATAACAACAACGACTATGATGACACCTTCTCAGAACTTGAGCTTCCTCCGATCATAACCAAGCAACCCAAGTTGTTAAAGAAGAGAGAACTGAAACAAGGGTCGTTGAAGGTGAGAATTGTGAAGGAAGAGTCTGCAATGAAGGAACAGAGGAACAGTGGTTCTGTGAGGCGGTTGTCTGTGAATTCTCCGGGGATGAGGTTGAGGGTCCACTCGCCCAAAATCGCCGCCTGGAAGGGGCGGAAAAGTGTGTCGTCGACGGCGAGTTCCGGCTCCCGGAGAAGCCTCTCGGAGAGTTTTGCGGTGGTGAAGTCTTCTTTTGACCCACAGAAGGATTTCAGGGAGTCGATGGTCGAGATGATTGTGGAGAACAACATAAGGGCATCGAAGGACTTGGAGGATCTACTTGCTTGCTACCTTTCTCTCAATTCAGATCAGTATCACGACCTCATCATCAAAGTCTTCAAGCAAATTTGGTTTGATTTGACTCAACCAAGGTAA 1167 0.4653 MGNHRFRLSDMIPNAWFYKLRDMGKGRKQNTTLSGKKKQTSITSTASTTHSSKPNQPLHQYSNNNNNNPRKSYYITRDLKNSPSNTPKFSPPRKSTKQRTKRRAPRTSKLVSSGCSCRSTLESMWTKSDSPLEHSSSSPFDSSPESDSPEFRTDRVLPCSSSFDEMVSLSTTSCASCRLNTNKNNHPTNDIIIDVDKNSIPRKDNKLDGYYSYHNDDDNKNSHNNNDYDDTFSELELPPIITKQPKLLKKRELKQGSLKVRIVKEESAMKEQRNSGSVRRLSVNSPGMRLRVHSPKIAAWKGRKSVSSTASSGSRRSLSESFAVVKSSFDPQKDFRESMVEMIVENNIRASKDLEDLLACYLSLNSDQYHDLIIKVFKQIWFDLTQPR 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g01429 388 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 66 385 IPR038933 GO:0045892
Viun10g01429 388 Pfam Transcriptional repressor, ovate 328 384 IPR006458 -
Viun10g01429 388 Pfam DNA-binding domain 1 41 IPR025830 GO:0003677
Viun10g01429 388 MobiDBLite consensus disorder prediction 127 146 - -
Viun10g01429 388 MobiDBLite consensus disorder prediction 27 93 - -
Viun10g01429 388 MobiDBLite consensus disorder prediction 204 226 - -
Viun10g01429 388 MobiDBLite consensus disorder prediction 27 115 - -
Viun10g01429 388 MobiDBLite consensus disorder prediction 127 153 - -
Viun10g01429 388 ProSiteProfiles OVATE domain profile. 324 383 IPR006458 -
Viun10g01429 388 NCBIfam uncharacterized plant-specific domain TIGR01568 322 385 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g01429 Viun-Chr10 28556087 28558067 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Viun10g01429 Ovate 1.3e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g01429 - - gmx:100785362 538.11