Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g01417 ATGGCATTGCGTGGATATTTCTTCGTACTTGTGTTTGTTGCTCTTGCAAGCTCAGCTTTCTCAGAATTGTCATCTCATTACTATGACTACTCTTGCCCCAAAGCTTTGAGCACCATCAAAACTGCTGTGGAGGCGGCGGTACAGAAAGAACGTCGTATGGGAGCATCCTTGACACGCCTGCACTTCCATGATTGCTTTGTTAACGGCTGCGATGGTTCGATTCTTCTAGATTCAACATCCTCCATTGACAGCGAGAAGAATTCAAATGCGAATTTCCAATCAGCTAGAGGGTTTGAAGTGGTGGATGAGATCAAGCAGGCTGTGGACGAAGCATGTGGGAAACCTGTTGTTTCTTGCGCAGACATATTGGCTGTTGCAGCTCGTGACTCTGTCGTTGCGTTAGGTGGTCCATCATGGAAGGTGAAACTGGGGAGAAGAGACTCCACCACAGCAAGTCGTGCAGCAGCAGATGCAAACATTCCAGCACCATTTTTCAGCCTCTCTCAACTCATCACCAACTTCAGGAACCATGGCCTTGATGAGAAGGACCTTGTTGTTCTTGCTGGAGGCCACTCCATCGGATATGCACGTTGTGCTACTTTTAGGGCTCATATCTACAACGACTCCAACATCGATCCCGACTTTGCCAAAGATCTCAAATACATTTGCCCTACAGCTGGTGCTGATTCCAACCTTTCTCCTCTGGACTCAACTGCTGCTCAATTTGACAAAAACTATTACTCTAATTTGGTCCAAAAGAAAGGGCTTCTTCACTCCGATCAAGAACTCTTCAATGGTGGCTCTACTGATGAGCTTGTCAGAGAGTATAGCTACGATTCTGAAGATTTCTACGAAGATTTCGCAAAGTCGATGATTAAGATGGGAAATATTCAGCCCCTCACAGGGAATCAAGGTGAAATTCGTGTTAACTGCAGGAAAGTAAACCAATGA 951 0.4585 MALRGYFFVLVFVALASSAFSELSSHYYDYSCPKALSTIKTAVEAAVQKERRMGASLTRLHFHDCFVNGCDGSILLDSTSSIDSEKNSNANFQSARGFEVVDEIKQAVDEACGKPVVSCADILAVAARDSVVALGGPSWKVKLGRRDSTTASRAAADANIPAPFFSLSQLITNFRNHGLDEKDLVVLAGGHSIGYARCATFRAHIYNDSNIDPDFAKDLKYICPTAGADSNLSPLDSTAAQFDKNYYSNLVQKKGLLHSDQELFNGGSTDELVREYSYDSEDFYEDFAKSMIKMGNIQPLTGNQGEIRVNCRKVNQ 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g01417 316 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun10g01417 316 PRINTS Haem peroxidase superfamily signature 54 68 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun10g01417 316 PRINTS Haem peroxidase superfamily signature 135 147 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun10g01417 316 PRINTS Haem peroxidase superfamily signature 183 198 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun10g01417 316 PRINTS Haem peroxidase superfamily signature 235 250 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun10g01417 316 ProSitePatterns Peroxidases proximal heme-ligand signature. 183 193 IPR019793 -
Viun10g01417 316 Pfam Peroxidase 40 277 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun10g01417 316 ProSiteProfiles Plant heme peroxidase family profile. 22 315 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun10g01417 316 PANTHER PEROXIDASE 72-RELATED 19 314 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun10g01417 316 FunFam Peroxidase 26 169 - -
Viun10g01417 316 PRINTS Plant peroxidase signature 182 194 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun10g01417 316 PRINTS Plant peroxidase signature 32 51 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun10g01417 316 PRINTS Plant peroxidase signature 249 266 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun10g01417 316 PRINTS Plant peroxidase signature 56 76 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun10g01417 316 PRINTS Plant peroxidase signature 96 109 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun10g01417 316 PRINTS Plant peroxidase signature 289 302 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun10g01417 316 PRINTS Plant peroxidase signature 135 150 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun10g01417 316 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun10g01417 316 PRINTS Plant peroxidase signature 233 248 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun10g01417 316 FunFam Peroxidase 161 294 - -
Viun10g01417 316 Gene3D Peroxidase, domain 2 161 294 - -
Viun10g01417 316 SUPERFAMILY Heme-dependent peroxidases 23 315 IPR010255 GO:0004601|GO:0006979|GO:0020037
Viun10g01417 316 CDD secretory_peroxidase 22 314 IPR033905 GO:0004601|GO:0042744
Viun10g01417 316 Gene3D - 27 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g01417 Viun-Chr10 28283435 28284817 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g01417 21 315 Peroxidase AT5G05340 60.067 9.19e-130 371
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g01417 K00430 - gmx:100790910 518.85