Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g01412 ATGGCTGGAAGTTCTCAACAAAGGGTCAAAATCTGTTTGGTCTTATGTCTTGTTGGTATAGTTTCAGCTTCTGCATATTCAACACCTTCATCATCATCAACAACTAGTTCTGGCACTTCATCTAATTTTCTGCTAAACCCCTTTTTTTATGCTTTCAAGTGTCCCCAAGCCCTTGACATCATTAAGAAACACGTAACCTATGCTGTGGCGAATGAGCCTCGCATGGGTGCTTCCTTGCTCCGTCTTCATTTCCATGATTGCTTTGTCCAAGGATGTGATGCATCGGTTTTGTTAGCGGACACAGCAACTTTCAAGGGCGAACAAGGTGCCTTACCCAACCTGAATTCTCTAAGGGGTTTTGATGTCGTAGAGAACATAAAAGCCGAACTAGAGCGTCAGTGCCCCGGTGTTGTCTCTTGTGCTGACATCTTAGCAGTTGCTGCAAGAGATTCTGTTGTTGCTCTTGGTGGGCTTGGATGGCCTATTGGCTTGGGAAGAAGAGACTCAACCACTGCAAGTTTAAGTGGAGCAAACTCTGATCTTCCATCTCCCTTTCTCAATCTTAATGGTCTTATCGCTGCTTTCCAAAAGAAGCAATTCACAAAAAATGAAATGGTGGCTTTATCAGGTGCTCACACAATAGGCAGTGCCAGATGTTTACTCTTCCGATCAAGGATTTATAACGAGAGCGATATAGACCCAACTTATGCAAACCTAATGAGAGCTAATTGCCCCAAGGTTGGTGGTGATAGCAACTTGTCTCCCATAGACATCTCCACTAAAGACTTTTTCGACGGTGCTTACTACACAAATTTGATCAACAAAAGGGGTCTTTTCCACTCCGATCAACAACTCTTCAGTGGCGGTTCCACGGCCATCCAGGTCACAACTTACAGCACTTTCCCGTCACTCTTTAAATTCGATTTTGCTAACGCCATGCTCAAGATGAGCAACCTTAGTCCACTCACCGGCACGCAGGGTCAGATCAGAAAAGTGTGCAGCAGAGTGAATTGA 1014 0.4467 MAGSSQQRVKICLVLCLVGIVSASAYSTPSSSSTTSSGTSSNFLLNPFFYAFKCPQALDIIKKHVTYAVANEPRMGASLLRLHFHDCFVQGCDASVLLADTATFKGEQGALPNLNSLRGFDVVENIKAELERQCPGVVSCADILAVAARDSVVALGGLGWPIGLGRRDSTTASLSGANSDLPSPFLNLNGLIAAFQKKQFTKNEMVALSGAHTIGSARCLLFRSRIYNESDIDPTYANLMRANCPKVGGDSNLSPIDISTKDFFDGAYYTNLINKRGLFHSDQQLFSGGSTAIQVTTYSTFPSLFKFDFANAMLKMSNLSPLTGTQGQIRKVCSRVN 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g01412 337 PRINTS Haem peroxidase superfamily signature 76 90 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun10g01412 337 PRINTS Haem peroxidase superfamily signature 156 168 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun10g01412 337 PRINTS Haem peroxidase superfamily signature 138 155 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun10g01412 337 PRINTS Haem peroxidase superfamily signature 204 219 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun10g01412 337 PRINTS Haem peroxidase superfamily signature 257 272 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun10g01412 337 ProSiteProfiles Plant heme peroxidase family profile. 44 337 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun10g01412 337 Gene3D Peroxidase, domain 2 182 316 - -
Viun10g01412 337 FunFam Peroxidase 48 190 - -
Viun10g01412 337 SUPERFAMILY Heme-dependent peroxidases 45 337 IPR010255 GO:0004601|GO:0006979|GO:0020037
Viun10g01412 337 CDD secretory_peroxidase 45 336 IPR033905 GO:0004601|GO:0042744
Viun10g01412 337 ProSitePatterns Peroxidases active site signature. 76 87 IPR019794 GO:0004601
Viun10g01412 337 PRINTS Plant peroxidase signature 78 98 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun10g01412 337 PRINTS Plant peroxidase signature 203 215 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun10g01412 337 PRINTS Plant peroxidase signature 118 131 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun10g01412 337 PRINTS Plant peroxidase signature 156 171 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun10g01412 337 PRINTS Plant peroxidase signature 311 324 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun10g01412 337 PRINTS Plant peroxidase signature 255 270 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun10g01412 337 PRINTS Plant peroxidase signature 54 73 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun10g01412 337 PRINTS Plant peroxidase signature 137 147 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun10g01412 337 PRINTS Plant peroxidase signature 271 288 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun10g01412 337 PANTHER PEROXIDASE 72-RELATED 45 336 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun10g01412 337 FunFam Peroxidase 182 316 - -
Viun10g01412 337 Gene3D - 49 334 - -
Viun10g01412 337 ProSitePatterns Peroxidases proximal heme-ligand signature. 204 214 IPR019793 -
Viun10g01412 337 Pfam Peroxidase 62 299 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g01412 Viun-Chr10 28184861 28187488 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g01412 49 337 Peroxidase AT5G05340 55.670 4.90e-119 344
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g01412 K00430 - gmx:100811432 467.233