Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g01367 ATGGCATTAGCTGTGGTAGGTGGTGCGCTCCTTTCTGCTTTCTTTGACGTTCTTTTTGACAGGCTGGCATCCCCTCAGGTTCTCAACTTCTTCCGAGGAAAGAAGCCTGACAAGTTGCTTCAAAAGATGAAGAACCAGCTGATAGTTGTTAGAGTTGTGCTTGCTGATGCTGAGAAGACACAAATCACAGACTCCACTGTCAAAGAGTGGCTCGATCTTCTCAGAGATCTTGTCTACGAGGTTGATGACTTACTTGATGAAGTTTCTACTAAAGCTGCTATTCAAAAGAAGAAGGTAAGCAATTCTTTTTCTCGCATTTTCAAAAGGAAGAAGATTGTTAGTATTAGTAAGTTGGAAGACATAGTTGAAAGATTAGATGACATTTTAAAACAAAAGGAGAGTCTTGATTTGAAAGATATTCCAGTGGAGAGCTACCAGTCATGGAAAGCTCAGCCAACATCTCTGGAAGATGGATACGGTATGTACGGTAGAGATAAAGATAAAGAGGCCATAATGAACATGGTGTTACAGGATGTCACTGATGATAGTGAACAAGTGTCTGTGATCCCTATTGTAGGCATGGGTGGGGTTGGAAAAACCACTTTGGCAAGATCTGTGTTCAACGATTGCAAATTGAACCAGCAGATATTTAATTCGAAGGCATGGGTTTGTGTTTCTGATATATTTGATATTGTGAAGGTCACAAGAACCATGGTAGAGGAAATTACCCGAAAGCCTTGTAAATTGAGTGATCTAAATGTTCTTCAACTTGAATTGATGGACAAACTGAAAGGTAAAAGATTTTTTATTGTCTTGGATGATGTTTGGATCGAGGATTGTGACAATTGGACAACTCTTACAAAACCATTTGTAAGCGGGATTAGGGGCAGTAAAGTTCTGATTACAACCCGCAATGAAAATGTAGCGGCTGCAGTGCCTTTTCATACTGTTGAAATATATCATCTAAACAAATTGTCAAATGAAGATTGTTGGTTGGTGTTTGCAAACCATGCATTTCCTCTCCAAGAAGCCAGCGAGAGAAGAGGAACCCTAGAAAAGATTGGAAAAGAGATTGTTAAAAAGTGTAATGGGTTGCCTTTAGCTGCACAGTCACTTGGAGGAATGTTGAGAAGAAAACACGCTGTCAGGGATTGGAATAATGTACTTGAAAGTGACATTTGGGAACTTCCTGGAGGTCAGTGTAAAATTATTCCAGCACTCACAATTAGTTATAATTATCTCCCTCCACATTTAAAACGGTGTTTTCTGTATTGCTCACTGTACCCGAAAGATTATGGATTTCAAGACAATGAACTGATCCAGTTGTGGATGGCTGAAGATCTTGTAAAAGCACCAAAGAAAGGAAAGACTTTAGAAGAAGTTGGTCACGAGTATTTTTATGATTTGGTTTCAAGATCTTTTTTTCAATGTGCAAGTCGATGGACTGGGGATGGGGATGATTGTTTCGTAATGCATGACCTCATGCATGATCTAGCAACATTCATTAGCGGGGAATTCTATCTCAGAGCAGATGAACTCGGAAAAGAAACCAAAATCGATAGAAAGACTCGTCATTTGTCATTTGCAACATTCAGTGATCCGGTCTCCGATATTGAAGTTTTTGACACGGTAACATTTCCTAGAATCCTTGACCTCTCGAGCTAG 1665 0.3964 MALAVVGGALLSAFFDVLFDRLASPQVLNFFRGKKPDKLLQKMKNQLIVVRVVLADAEKTQITDSTVKEWLDLLRDLVYEVDDLLDEVSTKAAIQKKKVSNSFSRIFKRKKIVSISKLEDIVERLDDILKQKESLDLKDIPVESYQSWKAQPTSLEDGYGMYGRDKDKEAIMNMVLQDVTDDSEQVSVIPIVGMGGVGKTTLARSVFNDCKLNQQIFNSKAWVCVSDIFDIVKVTRTMVEEITRKPCKLSDLNVLQLELMDKLKGKRFFIVLDDVWIEDCDNWTTLTKPFVSGIRGSKVLITTRNENVAAAVPFHTVEIYHLNKLSNEDCWLVFANHAFPLQEASERRGTLEKIGKEIVKKCNGLPLAAQSLGGMLRRKHAVRDWNNVLESDIWELPGGQCKIIPALTISYNYLPPHLKRCFLYCSLYPKDYGFQDNELIQLWMAEDLVKAPKKGKTLEEVGHEYFYDLVSRSFFQCASRWTGDGDDCFVMHDLMHDLATFISGEFYLRADELGKETKIDRKTRHLSFATFSDPVSDIEVFDTVTFPRILDLSS 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g01367 554 Gene3D - 324 409 IPR042197 -
Viun10g01367 554 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 144 425 IPR027417 -
Viun10g01367 554 Gene3D - 410 500 IPR036388 -
Viun10g01367 554 PRINTS Disease resistance protein signature 188 203 - -
Viun10g01367 554 PRINTS Disease resistance protein signature 262 276 - -
Viun10g01367 554 PRINTS Disease resistance protein signature 362 376 - -
Viun10g01367 554 PANTHER DISEASE RESISTANCE PROTEIN RP 50 528 IPR044974 GO:0006952
Viun10g01367 554 Coils Coil 115 138 - -
Viun10g01367 554 Pfam NB-ARC domain 171 390 IPR002182 GO:0043531
Viun10g01367 554 Pfam Rx N-terminal domain 11 105 IPR041118 -
Viun10g01367 554 Gene3D - 18 133 - -
Viun10g01367 554 FunFam Probable disease resistance protein At1g61300 160 316 - -
Viun10g01367 554 FunFam Probable disease resistance protein At1g63360 411 501 - -
Viun10g01367 554 Gene3D - 145 318 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g01367 Viun-Chr10 26392516 26394326 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g01367 160 379 WRKY Transcription Factor Family AT5G45050 25.778 7.54e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g01367 - - vun:114165464 1093.18