Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g01360 ATGGCATTAGCTGTGGTAGGTGGTGCGCTCCTTTCTGCTTTCATTGACGTTCTTTTTGACAGGCTAGCTTCTCCTGAGCTTGTCAATTTGATCCGTGGGAAGAAGCCTGACAAGTTGCTTCAAAAGGTGGAGAAGCAGCTGATAGTTATTAGAGTTGTGCTTGCTGATGCTGAGAATCGACAAATCACAGACCCCAATGTCAAAAAGTGGCTAGATGTTCTCAAAGATCTTGTCTACGAGGTTGATGACTTACTTGATGAAGTTTCTACTAAAGCTGCTGCTCAAAAGGAGTTACGCAATTCCTTTTCTCGCCTTTTCAAAAGGAACAAGATTGTTAGTATTAGTAAGATCGAAGACATAGTTGAAAGATTGGATGACATTTTAAAACAAAAGGAGAGTCTCGGTTTGAAAGATATTCCAGTGGAGTGCTATCAGCCATGGAAAGCTCATCAAACATCTTTGGAAGATGGTTATGGTATGTACGGTAGAGATAAAGATAAGGAAGCCATATTGAAAATGGTGTTAGAGGATAGCACTGATGGTGAACCGGTGTCTGTGATCCCTATTGTAGGCATGGGTGGGGTTGGAAAAACCACTTTGGCAAGATCTGTGTTCAACGATGACAAATTGAAGCAGCAGATATTTGATTTAAAGGCATGGGTTTGTGTTTCTGATTTATTTGATATTGTGAAGGTCACTAGAACTATGATAGAAGAAATTACCCGAAAGGCTTGTAAATTGAGTGATCTAAATGCCCTTCAACTTGAGTTGACGGACAAACTGAAAGGTAAGAGATTCTTGATTGTCTTGGATGATGTTTGGATCGAGGATTGTGACAATTGGAGTTGTCTTACAAAACCATTTCTAAGCGGGATTAGGGGCAGTAAAGTTCTGGTCACAACTCGCAATGAAAATGTAGCGGTTGCAGTGTCTTTTCATACTGTTGAAGTATATCGTCTAAACAAATTGTCAACTGAAGATTGTTGGTTGGTGTTTGCAAACCATGCATTTCCTCTCTCAGTAGACAGTCGAAGTAGAGGAACTCTAGAAAAGATTGGAAAGGAGATTGTTAAAAAGTGCAATGGGTTGCCTTTAGCTGCACAGTCACTTGGAGGAATGTTGAGAAGAAAACACACCGTTAGGGATTGGAATAATGTACTCGAAAGTGACATTTGGAAACTTCCTGAAGGTCAATGTAAAATTATTCCAGCACTTAGTATTAGTTATAATTATCTCCCTCCACATTTGAAACGGTGTTTTGTTTATTGCTCACTGTATCCCAAAGATTTTAATTTTAAAAAGGATGAACTGATCCAGTTGTGCATGGCAGAAGATCTTGTAATAGCACCAAACAAAGGAAAGACATTAGAAGAAGTTGGTGACGAGTATTTTGATGATTTGGTTTTGAGATCTTTTTTTCAACTTTCATACAGTTGGGCTCGGGGTAGTTATTTTGTAATGCATGACCTTATGCATGATCTAGCAGCATTCCTTGGAGGGAAATTCTATTTCAGAGCAGATGAACTTGGAAAAAAAACAAAAATCGATAGAAAAACTCGTCATTTGTCATTTACTAGATTCAGTGATCCAGTCTCGGACATTGAAGTTTTTGACATAGTAAAATTTCCAAGAACTTTTTTGCTGTTCAAATTTAAAGATTCTCTATTCAACAATGAAAAGGCACCACGTATTGTAGTGTCGATGCTTAAGTACTTGAGAGTTTTGTCCTTCTCTTACTTCCAAGGTCTGTTTGCTCTGCCTGATTCAATTGGTGAATTGATCCATTTGCGTTATCTAAATCTATCGTTTACAAGTATAAAAACTCTGCCGGAGTCATTGTGTAATTTGTGGAATCTACAGACTTTGAAGTTGTCTTTTTGCCGAGAGTTGACTAAGTTGCCTAAGTTGACTAAGTTGCCTAGTGACATGCAAAATCTTGTAAACTTGTGTTATCTTGAAATTCTGAACACTCCCATTAAAGAGATGCCTAAAAGAATGGGAAAACTGAATAAATTACAGAGGTTGGATTTCTATATTGTGGGCAAGCATATAGAGAATAGCATCAAAGAATTGGGAGGACTTCCAAATCTAAGTGGGTCGTTTGCTATTAAGGCACTGGAAAATGTTACCAAAGGCGAAGAAGCAATAGAAGCCAATATAATGGATAAAAAGCATATTTACGATCTATCCTTGGAATGGTCTATAGGTAATGATAATAGCATCAACTTCGAAACTGAATTAGATGTACTCAGCAAGTTAAAACCTCATCAAGACCTGAAATCATTGTTAATAGCGGGTTATAATGGAGCCAAATTTCCAGATTGGGTAGGGAATTTTTCCTACGGCAACATGACAAGTGTAAGTTTATATAATTGTGACAACTGTTGCATGCTTCCTTCAATGGGGCAACTACCATCTCTCAAGTCTCTCTGGATTTCACGCATGAATTCCGTGAAGACTATTGAAGAAGGCTTTCATAAGAACGAAGATGGTTCATCTGTGACTCTATTTCCCTCTCTTGAATGGCTACAGATTTCTTATATGCCTTGTTTGGAGGTGTTGAATTTCTTTGATTCAGAAGCTTTTCCTGTGCTTGAGTCTCTTTATATTAATTACTGCCCCAACCTAAGGGGAGATTTGCCAGAAAACCTACCTGCTCTGAAATCTCTCAACATTAAAATTTGCGAGCTTCTTGTCTCTTCTGTCACAAGGGCTCCCACCCTTCGAAGATTAGAGATACACAAAAGCAACAACGTAGTGTTTCATGAGTTTCCTCTTTTGGTGGAAAGTATAGACGTAGAAGGAGGCCCAATGGTAGAGTCCATGATGGAGGCCATCACTAACATCCAACCTACTTGCCTCCAATCTTTAACATTACAGAATTGTTCGTCAGCCATATCATTTCCAGGTGATTGTCTTCCTGCATTTCTGAAAACTCTTGAGATCAGTGGTTTAAAGAAACTGAAATTCCCTACTCAACACAAACACGAATCACTAACATCACTGTCAATAAATAATAGTTGTGAATCGCTAACATCTCTTCAATTGGCTATCTTCCCAAGCTGTGAAAATATGGAATCCCTTTTGGTCTCAGGGTCAGAATCGTTGAAGAGTTTGAATTCTTTAGAGATTGAACAATGTCCCAACTTTGTATCATTCCCGGGAGAGGGATTTTGTGCACCCAATTTGACTCGTTTCCTAATTTGTGATTGTGAGAAGTTGAAGTCGTTGCCCGATCAAATGAGAACTCTTCTTCCAAAAATGGAATATCTTAACATATCTAACTGCCAACAAATAGAGTCATTCCCTGAAGAGGGTATGCCACCTAACATGAGAACAGTTTGGATCGAAAATTGTGAGAAACTACTAAGAAGTAAAACATGGGTATGCATGGACATGGTTACCTCTCTCTATCTGTGTGGTCCATGTGATGGCCTCAACTCCTTCCCGGAGGAGGCTTTGCTGCCTCCCTCCCTTACGTCTCTGGTTCTACGTGATTTTTCAAGTCTGGAGACGTTGGACAGCAAGGGCTTTCTCCATCTCACTTCGCTACGAGAATTGGACATTGTAAATTGTAAAAAGCTGGAGAATATCACAGGAGAAAGGCTGCCTTCCGCTCTAATAAAATTAAGCATACGGGACTGTCCATTACTGCAAAAACGATGCCACAAGAAGGACCGTAAAATTTGGCCTAAAATCTGCCATGTCCGTGGGATAAAGATGGACGATAGATGGATTCAATGA 3744 0.3921 MALAVVGGALLSAFIDVLFDRLASPELVNLIRGKKPDKLLQKVEKQLIVIRVVLADAENRQITDPNVKKWLDVLKDLVYEVDDLLDEVSTKAAAQKELRNSFSRLFKRNKIVSISKIEDIVERLDDILKQKESLGLKDIPVECYQPWKAHQTSLEDGYGMYGRDKDKEAILKMVLEDSTDGEPVSVIPIVGMGGVGKTTLARSVFNDDKLKQQIFDLKAWVCVSDLFDIVKVTRTMIEEITRKACKLSDLNALQLELTDKLKGKRFLIVLDDVWIEDCDNWSCLTKPFLSGIRGSKVLVTTRNENVAVAVSFHTVEVYRLNKLSTEDCWLVFANHAFPLSVDSRSRGTLEKIGKEIVKKCNGLPLAAQSLGGMLRRKHTVRDWNNVLESDIWKLPEGQCKIIPALSISYNYLPPHLKRCFVYCSLYPKDFNFKKDELIQLCMAEDLVIAPNKGKTLEEVGDEYFDDLVLRSFFQLSYSWARGSYFVMHDLMHDLAAFLGGKFYFRADELGKKTKIDRKTRHLSFTRFSDPVSDIEVFDIVKFPRTFLLFKFKDSLFNNEKAPRIVVSMLKYLRVLSFSYFQGLFALPDSIGELIHLRYLNLSFTSIKTLPESLCNLWNLQTLKLSFCRELTKLPKLTKLPSDMQNLVNLCYLEILNTPIKEMPKRMGKLNKLQRLDFYIVGKHIENSIKELGGLPNLSGSFAIKALENVTKGEEAIEANIMDKKHIYDLSLEWSIGNDNSINFETELDVLSKLKPHQDLKSLLIAGYNGAKFPDWVGNFSYGNMTSVSLYNCDNCCMLPSMGQLPSLKSLWISRMNSVKTIEEGFHKNEDGSSVTLFPSLEWLQISYMPCLEVLNFFDSEAFPVLESLYINYCPNLRGDLPENLPALKSLNIKICELLVSSVTRAPTLRRLEIHKSNNVVFHEFPLLVESIDVEGGPMVESMMEAITNIQPTCLQSLTLQNCSSAISFPGDCLPAFLKTLEISGLKKLKFPTQHKHESLTSLSINNSCESLTSLQLAIFPSCENMESLLVSGSESLKSLNSLEIEQCPNFVSFPGEGFCAPNLTRFLICDCEKLKSLPDQMRTLLPKMEYLNISNCQQIESFPEEGMPPNMRTVWIENCEKLLRSKTWVCMDMVTSLYLCGPCDGLNSFPEEALLPPSLTSLVLRDFSSLETLDSKGFLHLTSLRELDIVNCKKLENITGERLPSALIKLSIRDCPLLQKRCHKKDRKIWPKICHVRGIKMDDRWIQ 1247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g01360 1247 SUPERFAMILY L domain-like 486 912 - -
Viun10g01360 1247 SUPERFAMILY L domain-like 948 1233 - -
Viun10g01360 1247 PRINTS Disease resistance protein signature 186 201 - -
Viun10g01360 1247 PRINTS Disease resistance protein signature 360 374 - -
Viun10g01360 1247 PRINTS Disease resistance protein signature 260 274 - -
Viun10g01360 1247 PRINTS Disease resistance protein signature 614 630 - -
Viun10g01360 1247 FunFam Probable disease resistance protein At1g61300 144 314 - -
Viun10g01360 1247 Pfam NB-ARC domain 164 409 IPR002182 GO:0043531
Viun10g01360 1247 Gene3D - 147 317 IPR027417 -
Viun10g01360 1247 Gene3D Ribonuclease Inhibitor 1107 1231 IPR032675 -
Viun10g01360 1247 PANTHER DISEASE RESISTANCE PROTEIN RP 56 873 IPR044974 GO:0006952
Viun10g01360 1247 Gene3D Ribonuclease Inhibitor 554 953 IPR032675 -
Viun10g01360 1247 Coils Coil 40 60 - -
Viun10g01360 1247 Pfam Rx N-terminal domain 11 100 IPR041118 -
Viun10g01360 1247 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 154 423 IPR027417 -
Viun10g01360 1247 Gene3D - 408 496 IPR036388 -
Viun10g01360 1247 Gene3D - 322 407 IPR042197 -
Viun10g01360 1247 Gene3D Ribonuclease Inhibitor 976 1106 IPR032675 -
Viun10g01360 1247 Gene3D - 13 123 - -
Viun10g01360 1247 FunFam Probable disease resistance protein At1g63360 409 497 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g01360 Viun-Chr10 26297171 26302795 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g01360 175 872 WRKY Transcription Factor Family AT5G45050 23.240 4.38e-11 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g01360 - - vun:114165446 1779.22