Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g01352 ATGGCATTAGCCGTAGTCGGTGGTGCGCTACTTTCTGCTTTCGTTGACGTTCTTTTCGAAAAGCTTGCCTCTCCTGAGGTTGTTAACTTGATCCGGGGAAAGAAGCCTGATAAGTTGCTCCAAAAGGTGAAGAACCAATTGATAGTTGTTAGAGTTGTGCTTGCTGATGCTGAGAAGAGACAAATCACTGACTCCACTGTCAAAGAGTGGCTCGATCTTCTCAAAGATGTTATCTATGAGGTTGATGACTTACTTGATGAAGTTTCTACTAAAGCTGCTACCCAAAAGGAGTTAAGCAATTCCTTTTCTCGCATTTTCAACAGGAAAAAGATTGTTAGTATTAGTAAGTTGGAAGAGATGGTTGAAAGGTTAGATGATATTCTAAAACAAAAGGAGAGTCTTGATTTGAAAGATATTCCTGTGGAGAGCTACCAGCAATGGAAAGCTCAACCAACATCTCTGGAAGATGGGTATGGTATGTACGGTAGAGACAAAGATAAGGAGGCCATAATGCAATTGGTGTTAGAGGATCGCACTGATGGTGAACAGGTGTCTGTGATCCCTATTGTAGGCATGGGTGGGGTTGGGAAAACCACTTTGGCCAGATCTGTGTTCAACGATGGCAAATTGAAGGAACAGATATTTGATTTAAAGGCATGGGTTTGTGTTTCTGATATATTTGATATGGTGAAGGTCACAAAAACTATGATAGAAGAAATTACCAAAAAGCCTTGTAAATTGAGTGATCTAAATGCCCTTCAACTTGACCTGATGGACAAACTGAAAGGTAAAAGATTCTTGATTGTCTTGGATGATGTTTGGATTGAGGATTTTGATAACTGGAGTAGTCTTACAAAACCATTTCTAAGCGGGATTAGAGGCAGTAAAATTCTTGTCACAACCCGCAATGAAAGTGTGGTTGTTAGAGTCCCTTTTCAAACTGTTAACGTACATCATCTAAACCAATTGTCAAATGAAGATTGTTGGTTGGTATTTGCAAACCATGCATTTCCTCTCTCAGAAGCCAATGAGAAAAGAGGAACCCTAGAAAAGATTGGGAAAGAGATTGTTAAAAAGTGTAATGGGTTGCCTTTAGCAGCACAATCGCTTGGAGGGATGTTGAGAAGAAAGCAGGCTATTAGGGATTGGATTAATGTACTTGAAAGTGAGATCTGGGAACTTCCTGAAGGTCAGTGTAAAATTATTCCAGCACTCAGAATTAGTTATCATCATCTCCCTCCACATTTAAAGCGGTGTTTTGTTTATTGCTCACTGTACCCCAAAGATTATGAATTTATAAAAGATGAACTGATCCAGCTGTGGATGGCTGAAGATATAGTAAAAGCACCCCAAAAAGGAAAGACTTTAGAAGAAGTTTGTCACGAGTATTTTGATGATTTGCTTTCGAGATCCTTTTTCCAATGTTCAAGTAGTCGGATTTGGGGTAATTGTTTCGTAATGCATGACCTCATGCATGACCTAGCGACATCCATTGGTGGGGAATTTTATTTCAGGACAGATGAATTTGGAAAAGAAACCAAAATTAGTAAAAAGACTCGTCATTTGTCTTTTACAAGGTTCAGTGATCCAGTCTCCGATATTGAAGTTTTTGACACAGTTAAATCTCCAAGAACATTCTTGCTGACCAATTATGTCTTTTCTCCATTCAACAACGAAATGGCACCACATATTATAGTGTCCATGCTTAAGTACTTGAGAGTTTTATCGTTTTGTCACTTCCAAAGTCCGTTTGCTCTGCCTGATTCAATTGGTCAATTGATCCATTTGCGTTATGTAAATCTCACTGGTACAAGTATAAAATCTTTGCCGGAGTCAGTGTGTAATTTGTACAATCTACAAACCTTGAAGTTGTCTTTTTGCTATAAGCTGACTAAGTTGCCTAGTGCCATGCAAAATCTTGTAAACTTGCGTTATCTTGAAATTCTTGATATTCCCATAAAAGAGATGCCTAAAAGGATGGGGAAACTAAATCAGTTACAGAAGTTGGACTTCTATATTGCAGGCAAGCGTGCAGAGAATAGCATCAAAGAACTGGGAGGACTTCCAAACCTCCGTGGTGCGTTTTCTATTAAGGGATTGGAGAATGTTACCAAAGGTGAAGAAGCATTGGAGGCCAGGATAAGGGATAAGAAACATATTACCCATCTATCCTTGGAATGGTCTATAGTCAATGACAATATCATCGACTTCCAAATTGAACTAGATGTACTCAGCAAGTTACAACCCCACCAAGACCTGAAATCGCTGTCAATAGATGGTTATAAAGGAACCAGATTTCCGAAATGGATGGGGAACTTTTGCTACTGCCACATGACACGTCTAAGTTTATATAATTGTAATAACTGTTGCATGCTTCCTTCAATGGGACAACTACCATCTCTCAAGTTCCTCAATATTTCAGACATGAATTCGGTGAAGACTATTGATGCAGAATTTTTTAAGATGGAAAATTGTTCGTCTGTGATACCCTTTCCCTCCCTTGAGCGTCTAGAAATTTCTGATATGCCTTGTTGGGAGGTGTGGAATTCCTTTGATTCAAAAGCTTTTCCTGTGCTTAAGTGCTTTTATATAACTGATTGCCCCAAACTAAAGGGAGCTTTGCCAAATCACCTTCCTGCTCTTCAAAATCTCAGCATTGTAAACTGCGAGCTTCTTGTCTCCTCTGTCCCAAGGGCTCCCACCCTTCGATCATTAGAGATACGCAAAAGCGACAAAGTAATGTTTCATGAGTTTCCTCTTTTGGTTGAAAGTATAGACGTAGAAGGAGGCCCAATGGTAGAGTCCATGATGGAGGCCATCACTAACATCCAACCTACTTGCCTCAAATATTTAACATTACAGAACTATTCGTCAGCCTTATTGTTTCCAGGTGATCGTCTTCCTGCATCGCTGAAAACTCTTCGTATCAGTGGTTTAACAAAAATGAAATTCCCGATGCAACACAAACACGAATTACTGGAATCACTGTCAATAAATAATAGTTGTGAATCGCTAACATCTCTTCAATTGGCTATCTTCCCAAATCTCACTTCTCTTAGAATCACAAACTGTGAAAATATGGAATCACTTTTGGTCTCTGGATCAGATTCGTTGAAGAGTTTGAACTGTGTTGAGATTGGCCACTGTCCCAACTTTGTATCATTCTTGGGAGAAGGATTGTCTGCGCCCAATTTGACTTGTTTTAGTTTTTATGATTGTGATAAGTTGAAGTCGTTGCCCGATCAGATGGGAACTCTTTTCCCAAAGATGGAATATCTTATCATATCCAACTGCCAACAAATTGAGTCATTCCCTGTAGGAGGTATGCCACCAAACTTGATAAAAGTTTCGATCAGCAATTGTGAGAAACTACTAAGCGGTAAAGCATGGGTATGCATGGACATGGTTACCTCTCTCGATGTGTGGGGACCATGTGATGGCATCAACTCCTTCCCAGAGGAGGGTTTGCTGCCTCCCTCCCTTAAGTCTCTACGTCTCTGTAACCTCTCAAGTCTGGAGACTCTGGACTGCATGGGCTTTCTCCATCTCACATCCCTACGCGAATTGTACATTGAAAATTGCAAAACGCTGGAGAATGTCGCGGGAGAAAGGCTGCCTGTCTCTCTAACAAAATTAATTATTATGGGGTGTCCCTTGCTGCAAAAACGATGCCACAAAAAGGACCGCCACATTTGGCCTAAAATCTGCCATGTCCGTGGGATAAAGATTGACGGTAGATGGATATAA 3747 0.4019 MALAVVGGALLSAFVDVLFEKLASPEVVNLIRGKKPDKLLQKVKNQLIVVRVVLADAEKRQITDSTVKEWLDLLKDVIYEVDDLLDEVSTKAATQKELSNSFSRIFNRKKIVSISKLEEMVERLDDILKQKESLDLKDIPVESYQQWKAQPTSLEDGYGMYGRDKDKEAIMQLVLEDRTDGEQVSVIPIVGMGGVGKTTLARSVFNDGKLKEQIFDLKAWVCVSDIFDMVKVTKTMIEEITKKPCKLSDLNALQLDLMDKLKGKRFLIVLDDVWIEDFDNWSSLTKPFLSGIRGSKILVTTRNESVVVRVPFQTVNVHHLNQLSNEDCWLVFANHAFPLSEANEKRGTLEKIGKEIVKKCNGLPLAAQSLGGMLRRKQAIRDWINVLESEIWELPEGQCKIIPALRISYHHLPPHLKRCFVYCSLYPKDYEFIKDELIQLWMAEDIVKAPQKGKTLEEVCHEYFDDLLSRSFFQCSSSRIWGNCFVMHDLMHDLATSIGGEFYFRTDEFGKETKISKKTRHLSFTRFSDPVSDIEVFDTVKSPRTFLLTNYVFSPFNNEMAPHIIVSMLKYLRVLSFCHFQSPFALPDSIGQLIHLRYVNLTGTSIKSLPESVCNLYNLQTLKLSFCYKLTKLPSAMQNLVNLRYLEILDIPIKEMPKRMGKLNQLQKLDFYIAGKRAENSIKELGGLPNLRGAFSIKGLENVTKGEEALEARIRDKKHITHLSLEWSIVNDNIIDFQIELDVLSKLQPHQDLKSLSIDGYKGTRFPKWMGNFCYCHMTRLSLYNCNNCCMLPSMGQLPSLKFLNISDMNSVKTIDAEFFKMENCSSVIPFPSLERLEISDMPCWEVWNSFDSKAFPVLKCFYITDCPKLKGALPNHLPALQNLSIVNCELLVSSVPRAPTLRSLEIRKSDKVMFHEFPLLVESIDVEGGPMVESMMEAITNIQPTCLKYLTLQNYSSALLFPGDRLPASLKTLRISGLTKMKFPMQHKHELLESLSINNSCESLTSLQLAIFPNLTSLRITNCENMESLLVSGSDSLKSLNCVEIGHCPNFVSFLGEGLSAPNLTCFSFYDCDKLKSLPDQMGTLFPKMEYLIISNCQQIESFPVGGMPPNLIKVSISNCEKLLSGKAWVCMDMVTSLDVWGPCDGINSFPEEGLLPPSLKSLRLCNLSSLETLDCMGFLHLTSLRELYIENCKTLENVAGERLPVSLTKLIIMGCPLLQKRCHKKDRHIWPKICHVRGIKIDGRWI 1248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g01352 1248 FunFam Probable disease resistance protein At1g61300 146 313 - -
Viun10g01352 1248 Gene3D - 144 315 IPR027417 -
Viun10g01352 1248 PANTHER DISEASE RESISTANCE PROTEIN RP 46 889 IPR044974 GO:0006952
Viun10g01352 1248 Coils Coil 114 137 - -
Viun10g01352 1248 Gene3D - 322 407 IPR042197 -
Viun10g01352 1248 Gene3D - 408 497 IPR036388 -
Viun10g01352 1248 Pfam Rx N-terminal domain 11 99 IPR041118 -
Viun10g01352 1248 CDD RX-CC_like 13 127 IPR038005 -
Viun10g01352 1248 SUPERFAMILY L domain-like 940 1235 - -
Viun10g01352 1248 PRINTS Disease resistance protein signature 360 374 - -
Viun10g01352 1248 PRINTS Disease resistance protein signature 614 630 - -
Viun10g01352 1248 PRINTS Disease resistance protein signature 260 274 - -
Viun10g01352 1248 PRINTS Disease resistance protein signature 186 201 - -
Viun10g01352 1248 SUPERFAMILY L domain-like 486 905 - -
Viun10g01352 1248 Gene3D Ribonuclease Inhibitor 1109 1231 IPR032675 -
Viun10g01352 1248 Gene3D Ribonuclease Inhibitor 922 1108 IPR032675 -
Viun10g01352 1248 FunFam Probable disease resistance protein At1g63360 409 497 - -
Viun10g01352 1248 Pfam NB-ARC domain 164 390 IPR002182 GO:0043531
Viun10g01352 1248 Gene3D Ribonuclease Inhibitor 512 919 IPR032675 -
Viun10g01352 1248 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 143 423 IPR027417 -
Viun10g01352 1248 Gene3D - 14 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g01352 Viun-Chr10 26213033 26218616 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g01352 184 664 WRKY Transcription Factor Family AT5G45050 22.222 2.91e-08 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g01352 - - vun:114165446 1887.85