Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g01349 ATGGGAACTTGTTGCAGCCATGTTTCAGTACATGATATGGAATCTTCATGCAAGCCTAACCATAATGATGGTGCATGTGAACATGATGGGGACCGTATCATGTCAAGAGGGTCCTCTGAGTTTGTATCAATGTACAGCAAAAAGGGTTCAAAAGGAGTTAATCAAGATGCATTCACTGTGTGGAAGGACTTCACTAAAACGAAGGACATGATCTTTTGTGGGGTGTTTGATGGTCATGGCCCTCTGGGGCACAGGTTTTCACAGTCTATACGTGACAAACTACCCTCAAAACTCTCAGAATCAATCAAACAGTCACAACAAAAGGTGATCAAACACAATGATACTAATGCTACAGATGGAAGTAGTGATAGTAATGTCCATGTTGAGGATAACCAAAACATGTCCTTTGCTTCATGGGAGGGAAGTTTTAAGACGTGCTTCACTGAAATGGATGAAGACCTTGCTACGAACATAGACCCTACAGGGTTAGCTGGAGGTAGCACTGCTGTAACTGTTATCAAACAGGGTGACCAATTAATTATTGGCAATTTGGGGGATTCACGTGCAGTTCTTTGCAGAAGAGCAGATGACAACAATCTTGTTCCTGTTCAACTTACTGTTGACTTGACCCCAGATATTCCAAGTGAAGCTTTAAGAATCATTAACTGCGGAGGTAAAATATTTTCTATAAAAGAAGAACCAAGAGTAAATAGACTATGGAGGCCAAATGGGGATCGCCCTGGACTGGCTATGGCAAGAGCCTTCGGAGATTTTTGCCTAAAAGAATATGGTCTCATCTCAGTTCCTGATGTGTCATACAGAAAACTTACAGAGCAGGATGAGTTTGTGGTTTTGGCTTCTGATGGGGTATGGGATGTGCTAACAAACAGTGAAGTAATAGACATAGTTGCTTCAGCACCAAAAAGGTCCATGGCGGCTAAATTGTTAGTGGACCATGCAGTTAAAGTTTGGAGACGTAAGTATAAATCCATGGTTGATGATTGTACTGCTATATGCTTGTTCCTGAAGGATCAAACTGTTCTAACCCAACCCTGA 1056 0.4176 MGTCCSHVSVHDMESSCKPNHNDGACEHDGDRIMSRGSSEFVSMYSKKGSKGVNQDAFTVWKDFTKTKDMIFCGVFDGHGPLGHRFSQSIRDKLPSKLSESIKQSQQKVIKHNDTNATDGSSDSNVHVEDNQNMSFASWEGSFKTCFTEMDEDLATNIDPTGLAGGSTAVTVIKQGDQLIIGNLGDSRAVLCRRADDNNLVPVQLTVDLTPDIPSEALRIINCGGKIFSIKEEPRVNRLWRPNGDRPGLAMARAFGDFCLKEYGLISVPDVSYRKLTEQDEFVVLASDGVWDVLTNSEVIDIVASAPKRSMAAKLLVDHAVKVWRRKYKSMVDDCTAICLFLKDQTVLTQP 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g01349 351 MobiDBLite consensus disorder prediction 107 128 - -
Viun10g01349 351 SUPERFAMILY PP2C-like 38 344 IPR036457 -
Viun10g01349 351 PANTHER PROTEIN PHOSPHATASE 39 340 IPR015655 GO:0004722|GO:0006470
Viun10g01349 351 CDD PP2Cc 41 342 IPR001932 -
Viun10g01349 351 Pfam Protein phosphatase 2C 98 322 IPR001932 -
Viun10g01349 351 Gene3D - 33 345 IPR036457 -
Viun10g01349 351 SMART PP2C_4 31 340 IPR001932 -
Viun10g01349 351 ProSiteProfiles PPM-type phosphatase domain profile. 41 342 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g01349 Viun-Chr10 26199515 26201731 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g01349 32 344 PP2C-type Phosphatase Gene Family AT1G16220 48.632 6.85e-111 330
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g01349 - - vra:106755106 629.402