Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g01246 ATGGCACTGGAAGTGCTTGAAGCGCTCGATTCAGCGCGAACCCAATGGTACCACGTTACGGCCATAGTGATCGCAGGCATGGGGTTCTTCACCGACGCCTACGACCTTTTCTGCATCTCCACGGTTTCCAAACTTCTGGGACGCTTGTACTACTTCGATCCTAGCTCCAGCAGTCCGGGGAAGCTCCCAACATCAGTCAACAACTTTGTCATTGGTGTCGCCATTGTTGGAACCCTCTGCGGCCAGCTAGTCTTCGGCTGGCTCGGCGACAAGCTCGGTCGGAAAAAGGTCTACGGAATCACTCTCATCCTCATGGTTCTCTGCGCCATCGCCTCCGGTCTCTCATTCGGCGCCAGCGCGAAATCCGTAATGGGAACGCTGTGTTTCTTCCGCTTCTGGCTCGGCTTTGGTATCGGCGGCGACTACCCACTCTCCGCCACTATCATGTCGGAGTACGCCAACAAGAGGACACGTGGGGCGTTTATAGCCGCCGTGTTCGCCATGCAGGGCGTGGGAATCATCTTCGCAGGGCTTGTCTCCATGACACTCTCCGGGCTTTTCCAATCCTATTACCATGCTCCGACGTATACCCAAAACCGCGTCACGTCCACGCAACCGGAGAGTGATCTTCTATGGCGGTTGGTTCTCATGATCGGTGCCATTCCGGCATTGTTGACTTACTACTGGCGAATGAAGATGCCAGAGACGGGGCGTTACACTGCAATCATAGAAGGTAACGCCAAACAAGCTGCGGCGGATATGGCGAGAGTTTTGGACATTGAAATCCAAGCAGAGCAGGATAAGCTTGCCGATTTCAACGCAGCGAATAACTACCCTTTGTGGTCGAACGAGTTCTTTGAGCGTCATGGGCGTCATTTGATAGGAACCATGAGTTCATGGTTTCTTCTTGACATCGCGTTTTACAGCCAGAATCTAACGCAGAAGGATATTTTCCCTGCCATTGGACTCATAGACAAAGATCATGACATGAGCGCCATCGGTGAAGTGTTCCAGACGTCACGTGCCATGTTCGTGATCGCGCTGTTCGGAACCTTCCCTGGTTACTGGTTCACTGTTTTCTTCATCGAGAAGCTGGGGCGCTACAAGATCCAACTCGTGGGCTTTTTCATGATGTCGTTCTTCATGTTTGTGATCGGTGTGAAGTACGATTACCTCAAGAACGAGAACAAGGGCGCCTTCGCTGTTCTCTACGGCTTGACGTTTTTCTTCGCAAACTTCGGACCCAACAGCACGACCTTCGTGCTTCCCGCGGAGCTGTTTCCGACGCGGGTGAGGAGCACGTGCCATGCGCTAAGTGCGGCGGCGGGGAAGGCCGGGGCGCTGGTCGGGACGTTCGGGATACAGAGCTTGACGGTGGGTGGAGACACGTACAAGATTAAGAAGGCGATGATTTTGCTGGCGGTGACTAACCTGGTAGGGTTCTTCTGCTCGTTCTTGGTTACTGAGACTAAGGGAAGATCATTGGAGGAGATTTCCGGTGAGGATGGGAGAGAGAGTGAACTCACGCCAACGCCCCGCGATTCTAGGGCTCCGGTGTCAAGGACAGAGACCATGTGA 1578 0.5374 MALEVLEALDSARTQWYHVTAIVIAGMGFFTDAYDLFCISTVSKLLGRLYYFDPSSSSPGKLPTSVNNFVIGVAIVGTLCGQLVFGWLGDKLGRKKVYGITLILMVLCAIASGLSFGASAKSVMGTLCFFRFWLGFGIGGDYPLSATIMSEYANKRTRGAFIAAVFAMQGVGIIFAGLVSMTLSGLFQSYYHAPTYTQNRVTSTQPESDLLWRLVLMIGAIPALLTYYWRMKMPETGRYTAIIEGNAKQAAADMARVLDIEIQAEQDKLADFNAANNYPLWSNEFFERHGRHLIGTMSSWFLLDIAFYSQNLTQKDIFPAIGLIDKDHDMSAIGEVFQTSRAMFVIALFGTFPGYWFTVFFIEKLGRYKIQLVGFFMMSFFMFVIGVKYDYLKNENKGAFAVLYGLTFFFANFGPNSTTFVLPAELFPTRVRSTCHALSAAAGKAGALVGTFGIQSLTVGGDTYKIKKAMILLAVTNLVGFFCSFLVTETKGRSLEEISGEDGRESELTPTPRDSRAPVSRTETM 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g01246 525 NCBIfam phosphate:H+ symporter 6 501 IPR004738 GO:0005315|GO:0006817|GO:0016020
Viun10g01246 525 Pfam Sugar (and other) transporter 22 499 IPR005828 GO:0016020|GO:0022857|GO:0055085
Viun10g01246 525 MobiDBLite consensus disorder prediction 496 511 - -
Viun10g01246 525 SUPERFAMILY MFS general substrate transporter 8 499 IPR036259 -
Viun10g01246 525 CDD MFS_PhT 22 491 - -
Viun10g01246 525 Gene3D MFS general substrate transporter like domains 17 514 IPR036259 -
Viun10g01246 525 ProSiteProfiles Major facilitator superfamily (MFS) profile. 21 492 IPR020846 GO:0022857
Viun10g01246 525 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 18 496 - -
Viun10g01246 525 MobiDBLite consensus disorder prediction 496 525 - -
Viun10g01246 525 FunFam Inorganic phosphate transporter 1-6 17 511 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g01246 Viun-Chr10 23688537 23690205 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g01246 3 501 Inorganic Solute Cotransporters AT5G43350 63.014 0.0 657
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g01246 K08176 - gmx:100805284 930.243