Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g01207 ATGGAGGGTCATCATCTCCATCGCCACCATGGGCAACAACAACAACCACAGCAACAAAGGCTTCCGCCTCAGAATACGAGTGCCAACGTGGATGCGTCTGATAGGTTTCCCCAATGGAGTATCCAAGAGACTAAGGAGTTTCTCGTGATTCGTGCAGAGCTGGATCAGACTTTCATGGAGACTAAGAGGAACAAGCAGTTATGGGAGGTGATCTCAACGAGAATGAAGGAAAAGGGTTACCATAGAAGTGCAGAGCAGTGCAAGTGCAAGTGGAAAAACCTCGTTACTCGCTACAAGGGGTTTGAAACAATGGAGCAAGAAGCGACGAGGCAGCAATTCCCATTTTACAATGAGTTCAATGCGATTTTCACGGCAAGGATGCAGAGAATGCTGTGGGCTGAAGCTGAGGGTGGGTCGAAGAAGAACAAGGGGACGCAGCTTTCATCCGATGAAGAAGAAGATGGCAATGAAGAGAGTGCAGAAGCTGGTGGTGGAAGAAAGAAGAAAAAGGCAAAGATAGCAGGAAGTGGTGGTGGTGGTGGTAGTTTGAACAGTTTGAAGGAGATTCTGGAGGAGTTCATGAGGCAACAGATGCAGATAGAAGCACAGTGGATGGAAGCATTTGAGGCAAGGGAAAACGAGAGGAGGTTGAAGGAGATGGAGTGGAGGCAAGCCATGGAAGTGTTGGAGAATGAGAGGATAATGATGGAAGAACGATGGAGAGAAAGAGAGGAACAAAGGAGGATCAGAGAAGAAGCTAGGGCTGAGAAAAGGGATGCTTTAATCACAGCTTTGCTAAACAAGCTAGAGAGGCAAGAAATGTGA 825 0.4752 MEGHHLHRHHGQQQQPQQQRLPPQNTSANVDASDRFPQWSIQETKEFLVIRAELDQTFMETKRNKQLWEVISTRMKEKGYHRSAEQCKCKWKNLVTRYKGFETMEQEATRQQFPFYNEFNAIFTARMQRMLWAEAEGGSKKNKGTQLSSDEEEDGNEESAEAGGGRKKKKAKIAGSGGGGGSLNSLKEILEEFMRQQMQIEAQWMEAFEARENERRLKEMEWRQAMEVLENERIMMEERWREREEQRRIREEARAEKRDALITALLNKLERQEM 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g01207 274 CDD GT1 37 100 - -
Viun10g01207 274 MobiDBLite consensus disorder prediction 12 34 - -
Viun10g01207 274 FunFam Zinc finger and SCAN domain-containing 20 39 100 - -
Viun10g01207 274 Pfam Myb/SANT-like DNA-binding domain 38 122 IPR044822 -
Viun10g01207 274 MobiDBLite consensus disorder prediction 1 34 - -
Viun10g01207 274 Coils Coil 183 203 - -
Viun10g01207 274 ProSiteProfiles Myb-like domain profile. 39 95 IPR001005 -
Viun10g01207 274 PANTHER FI21293P1 16 270 - -
Viun10g01207 274 Gene3D - 39 100 - -
Viun10g01207 274 MobiDBLite consensus disorder prediction 136 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g01207 Viun-Chr10 22433821 22435714 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g01207 25 271 Trihelix Transcription Factor Family AT5G01380 52.669 3.55e-69 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Viun10g01207 Myb_DNA-bind_4 8.4e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g01207 - - gmx:100818384 359.762